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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 844 845 846 847 848 849 850 851 852 ... 1720 1721 » 42351-42400 / 86044 show all
gduggal-snapplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	86.6667	86.6667	86.6667	95.8564	13	2	13	2	1	50.0000
gduggal-snapplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	40.0000	33.3333	50.0000	98.1982	1	2	1	1	0	0.0000
gduggal-snapplat	SNP	tv	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	86.6667	86.6667	86.6667	95.8564	13	2	13	2	1	50.0000
gduggal-snapvard	INDEL	*	decoy	homalt	50.0000	33.3333	100.0000	99.9610	1	2	1	0	0
gduggal-snapvard	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	0.0000	33.3333	0.0000	0.0000	1	2	0	0	0
gduggal-snapvard	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	0.0000	33.3333	0.0000	0.0000	1	2	0	0	0
gduggal-snapvard	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	2	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	decoy	homalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l125_m0_e0	homalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m1_e0	het	40.0000	33.3333	50.0000	93.9394	1	2	1	1	0	0.0000
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m2_e0	het	40.0000	33.3333	50.0000	95.0000	1	2	1	1	0	0.0000
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m2_e1	het	40.0000	33.3333	50.0000	95.1220	1	2	1	1	0	0.0000
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	61.5385	80.0000	50.0000	99.8383	8	2	2	2	2	100.0000
gduggal-snapplat	INDEL	D16_PLUS	decoy	homalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l125_m0_e0	homalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D16_PLUS	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	0.0000	0.0000	100.0000	99.8440	0	2	1	0	0
gduggal-snapplat	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	0.0000	0.0000	100.0000	99.8395	0	2	1	0	0
gduggal-snapplat	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt	55.8376	84.6154	41.6667	48.2759	11	2	25	35	28	80.0000
gduggal-snapplat	INDEL	D1_5	map_l125_m0_e0	hetalt	40.0000	33.3333	50.0000	99.4652	1	2	1	1	1	100.0000
gduggal-snapplat	INDEL	D1_5	map_l250_m1_e0	hetalt	50.0000	33.3333	100.0000	99.7183	1	2	1	0	0
gduggal-snapplat	INDEL	D1_5	map_l250_m2_e0	hetalt	50.0000	33.3333	100.0000	99.7455	1	2	1	0	0
gduggal-snapplat	INDEL	D1_5	map_l250_m2_e1	hetalt	50.0000	33.3333	100.0000	99.7500	1	2	1	0	0
gduggal-snapplat	INDEL	D1_5	tech_badpromoters	hetalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D6_15	func_cds	hetalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	66.6667	50.0000	100.0000	98.5294	2	2	1	0	0
gduggal-snapplat	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D6_15	map_l250_m1_e0	hetalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D6_15	map_l250_m1_e0	homalt		60.0000		100.0000	3	2	0	0	0
gduggal-snapplat	INDEL	D6_15	map_l250_m2_e0	hetalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapplat	INDEL	D6_15	map_l250_m2_e1	hetalt		0.0000		100.0000	0	2	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	func_cds	homalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	het		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	het		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	map_l100_m0_e0	homalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	map_l125_m0_e0	homalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	map_l150_m0_e0	het		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	map_l150_m1_e0	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
gduggal-snapplat	INDEL	I16_PLUS	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0

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