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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 837 838 839 840 841 842 843 844 845 ... 1720 1721 » 42001-42050 / 86044 show all
bgallagher-sentieon	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_51to200	hetalt	90.9091	83.3333	100.0000	42.1053	10	2	11	0	0
bgallagher-sentieon	INDEL	I6_15	map_l100_m0_e0	het	90.9091	88.2353	93.7500	93.2203	15	2	15	1	1	100.0000
bgallagher-sentieon	INDEL	I6_15	map_l100_m1_e0	hetalt	95.2381	90.9091	100.0000	80.3922	20	2	20	0	0
bgallagher-sentieon	INDEL	I6_15	map_l100_m2_e0	hetalt	95.2381	90.9091	100.0000	82.3009	20	2	20	0	0
bgallagher-sentieon	INDEL	I6_15	map_l100_m2_e1	hetalt	95.2381	90.9091	100.0000	82.9060	20	2	20	0	0
bgallagher-sentieon	INDEL	I6_15	map_l125_m0_e0	het	82.3529	77.7778	87.5000	95.6522	7	2	7	1	1	100.0000
bgallagher-sentieon	INDEL	I6_15	map_l150_m0_e0	*	80.0000	75.0000	85.7143	97.0833	6	2	6	1	1	100.0000
bgallagher-sentieon	INDEL	I6_15	map_l150_m1_e0	het	89.6552	86.6667	92.8571	95.2703	13	2	13	1	1	100.0000
bgallagher-sentieon	INDEL	I6_15	map_l150_m2_e0	het	89.6552	86.6667	92.8571	95.7187	13	2	13	1	1	100.0000
bgallagher-sentieon	INDEL	I6_15	map_l150_m2_e1	het	90.3226	87.5000	93.3333	95.5357	14	2	14	1	1	100.0000
bgallagher-sentieon	INDEL	I6_15	map_l250_m1_e0	*	76.9231	71.4286	83.3333	97.8947	5	2	5	1	1	100.0000
bgallagher-sentieon	INDEL	I6_15	map_l250_m2_e0	*	80.0000	75.0000	85.7143	97.7987	6	2	6	1	1	100.0000
bgallagher-sentieon	INDEL	I6_15	map_l250_m2_e1	*	80.0000	75.0000	85.7143	97.8979	6	2	6	1	1	100.0000
bgallagher-sentieon	INDEL	I6_15	segdup	het	98.1818	97.5904	98.7805	93.7690	81	2	81	1	0	0.0000
bgallagher-sentieon	SNP	*	HG002complexvar	hetalt	99.6764	99.3548	100.0000	35.9667	308	2	308	0	0
bgallagher-sentieon	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	*	97.5610	95.2381	100.0000	97.2918	40	2	40	0	0
bgallagher-sentieon	SNP	*	lowcmp_SimpleRepeat_diTR_51to200	het	96.1538	92.5926	100.0000	97.7457	25	2	25	0	0
bgallagher-sentieon	SNP	*	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.9452	99.9270	99.9635	30.8140	2736	2	2736	1	1	100.0000
bgallagher-sentieon	SNP	*	map_l100_m1_e0	hetalt	97.5000	95.1220	100.0000	70.4545	39	2	39	0	0
bgallagher-sentieon	SNP	*	map_l100_m2_e0	hetalt	97.5610	95.2381	100.0000	72.7891	40	2	40	0	0
bgallagher-sentieon	SNP	*	map_l100_m2_e1	hetalt	97.6190	95.3488	100.0000	72.2973	41	2	41	0	0
bgallagher-sentieon	SNP	*	map_l125_m1_e0	hetalt	96.5517	93.3333	100.0000	71.4286	28	2	28	0	0
bgallagher-sentieon	SNP	*	map_l125_m2_e0	hetalt	96.5517	93.3333	100.0000	76.0684	28	2	28	0	0
bgallagher-sentieon	SNP	*	map_l125_m2_e1	hetalt	96.5517	93.3333	100.0000	76.0684	28	2	28	0	0
bgallagher-sentieon	SNP	*	map_l150_m1_e0	hetalt	94.7368	90.0000	100.0000	76.3158	18	2	18	0	0
bgallagher-sentieon	SNP	*	map_l150_m2_e0	hetalt	94.7368	90.0000	100.0000	80.0000	18	2	18	0	0
bgallagher-sentieon	SNP	*	map_l150_m2_e1	hetalt	94.7368	90.0000	100.0000	80.0000	18	2	18	0	0
bgallagher-sentieon	SNP	ti	HG002complexvar	hetalt	99.5146	99.0338	100.0000	35.3312	205	2	205	0	0
bgallagher-sentieon	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	99.5149	99.7222	99.3084	87.5709	718	2	718	5	4	80.0000
bgallagher-sentieon	SNP	ti	lowcmp_SimpleRepeat_triTR_11to50	het	99.7984	99.9193	99.6778	30.7392	2476	2	2475	8	0	0.0000
bgallagher-sentieon	SNP	ti	map_siren	hetalt	98.2143	96.4912	100.0000	68.3908	55	2	55	0	0
bgallagher-sentieon	SNP	ti	tech_badpromoters	*	98.2249	97.6471	98.8095	45.0980	83	2	83	1	1	100.0000
bgallagher-sentieon	SNP	ti	tech_badpromoters	het	97.6744	95.4545	100.0000	48.1481	42	2	42	0	0
bgallagher-sentieon	SNP	tv	HG002complexvar	hetalt	99.6764	99.3548	100.0000	35.9667	308	2	308	0	0
bgallagher-sentieon	SNP	tv	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.9275	99.9275	99.9275	36.2312	2756	2	2756	2	2	100.0000
bgallagher-sentieon	SNP	tv	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.9237	99.8474	100.0000	34.5500	1309	2	1309	0	0
bgallagher-sentieon	SNP	tv	map_l100_m1_e0	hetalt	97.5000	95.1220	100.0000	70.4545	39	2	39	0	0
bgallagher-sentieon	SNP	tv	map_l100_m2_e0	hetalt	97.5610	95.2381	100.0000	72.7891	40	2	40	0	0
bgallagher-sentieon	SNP	tv	map_l100_m2_e1	hetalt	97.6190	95.3488	100.0000	72.2973	41	2	41	0	0
bgallagher-sentieon	SNP	tv	map_l125_m1_e0	hetalt	96.5517	93.3333	100.0000	71.4286	28	2	28	0	0
bgallagher-sentieon	SNP	tv	map_l125_m2_e0	hetalt	96.5517	93.3333	100.0000	76.0684	28	2	28	0	0
bgallagher-sentieon	SNP	tv	map_l125_m2_e1	hetalt	96.5517	93.3333	100.0000	76.0684	28	2	28	0	0
bgallagher-sentieon	SNP	tv	map_l150_m1_e0	hetalt	94.7368	90.0000	100.0000	76.3158	18	2	18	0	0
bgallagher-sentieon	SNP	tv	map_l150_m2_e0	hetalt	94.7368	90.0000	100.0000	80.0000	18	2	18	0	0
bgallagher-sentieon	SNP	tv	map_l150_m2_e1	hetalt	94.7368	90.0000	100.0000	80.0000	18	2	18	0	0
bgallagher-sentieon	SNP	tv	tech_badpromoters	*	97.9021	97.2222	98.5915	53.5948	70	2	70	1	1	100.0000
cchapple-custom	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	94.7368	90.0000	100.0000	99.4547	18	2	18	0	0
cchapple-custom	INDEL	*	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	75.0000	60.0000	100.0000	99.6774	3	2	3	0	0
cchapple-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	93.7500	88.2353	100.0000	99.5292	15	2	15	0	0
cchapple-custom	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt	66.6667	50.0000	100.0000	99.7805	2	2	2	0	0

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