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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 832 833 834 835 836 837 838 839 840 ... 1720 1721 » 41751-41800 / 86044 show all
bgallagher-sentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7250	99.6337	99.8165	77.9173	544	2	544	1	1	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt	69.6970	97.1831	54.3307	50.1961	69	2	69	58	58	100.0000
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.6750	99.5671	99.7831	28.3048	460	2	460	1	1	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l100_m0_e0	hetalt	88.8889	85.7143	92.3077	92.6554	12	2	12	1	0	0.0000
bgallagher-sentieon	INDEL	D1_5	map_l125_m1_e0	homalt	99.4269	99.4269	99.4269	85.2494	347	2	347	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l125_m2_e0	homalt	99.4505	99.4505	99.4505	86.0108	362	2	362	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l125_m2_e1	homalt	99.4624	99.4624	99.4624	86.0098	370	2	370	2	2	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l150_m0_e0	*	97.7917	99.3080	96.3211	91.7060	287	2	288	11	1	9.0909
bgallagher-sentieon	INDEL	D1_5	map_l150_m0_e0	het	97.0991	99.0099	95.2607	91.9833	200	2	201	10	0	0.0000
bgallagher-sentieon	INDEL	D1_5	map_l150_m1_e0	homalt	99.3407	99.1228	99.5595	87.4377	226	2	226	1	1	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l150_m2_e0	homalt	99.3789	99.1736	99.5851	88.1105	240	2	240	1	1	100.0000
bgallagher-sentieon	INDEL	D1_5	map_l150_m2_e1	homalt	99.1935	99.1935	99.1935	88.0424	246	2	246	2	2	100.0000
bgallagher-sentieon	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	98.3899	99.9450	96.8825	62.1062	3636	2	3636	117	115	98.2906
bgallagher-sentieon	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.7394	99.6528	99.8261	68.9860	574	2	574	1	1	100.0000
anovak-vg	INDEL	I16_PLUS	tech_badpromoters	het		0.0000	0.0000	0.0000	0	2	0	1	1	100.0000
anovak-vg	INDEL	I1_5	func_cds	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
anovak-vg	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	het	0.0000	0.0000	41.6667	69.2308	0	2	5	7	7	100.0000
anovak-vg	INDEL	I1_5	map_l125_m0_e0	hetalt	0.0000	50.0000	0.0000	0.0000	2	2	0	0	0
anovak-vg	INDEL	I1_5	map_l150_m0_e0	hetalt	0.0000	33.3333	0.0000	0.0000	1	2	0	0	0
anovak-vg	INDEL	I1_5	map_l250_m0_e0	homalt	66.9856	77.7778	58.8235	97.3725	7	2	10	7	7	100.0000
anovak-vg	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	*		0.0000		100.0000	0	2	0	0	0
anovak-vg	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
anovak-vg	INDEL	I6_15	map_l125_m1_e0	homalt	78.7879	86.6667	72.2222	87.0504	13	2	13	5	4	80.0000
anovak-vg	INDEL	I6_15	map_l125_m2_e0	homalt	78.7879	86.6667	72.2222	89.0244	13	2	13	5	4	80.0000
anovak-vg	INDEL	I6_15	map_l125_m2_e1	homalt	78.7879	86.6667	72.2222	89.3491	13	2	13	5	4	80.0000
anovak-vg	INDEL	I6_15	map_l150_m0_e0	*	72.0000	75.0000	69.2308	92.6966	6	2	9	4	1	25.0000
anovak-vg	INDEL	I6_15	map_l150_m1_e0	homalt	74.4681	71.4286	77.7778	91.4286	5	2	7	2	1	50.0000
anovak-vg	INDEL	I6_15	map_l150_m2_e0	homalt	74.4681	71.4286	77.7778	92.8000	5	2	7	2	1	50.0000
anovak-vg	INDEL	I6_15	map_l150_m2_e1	homalt	73.8462	75.0000	72.7273	91.6667	6	2	8	3	2	66.6667
anovak-vg	SNP	*	lowcmp_SimpleRepeat_triTR_51to200	het	65.2174	71.4286	60.0000	94.8454	5	2	6	4	2	50.0000
anovak-vg	SNP	ti	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
anovak-vg	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	het	66.6667	66.6667	66.6667	95.5556	4	2	4	2	1	50.0000
anovak-vg	SNP	ti	segdup	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
astatham-gatk	INDEL	*	HG002compoundhet	homalt	60.8541	99.7085	43.7900	84.6320	684	2	684	878	876	99.7722
astatham-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7617	99.8940	99.6298	72.6774	1884	2	1884	7	5	71.4286
astatham-gatk	INDEL	*	lowcmp_SimpleRepeat_quadTR_51to200	homalt	98.6908	99.5935	97.8044	62.3591	490	2	490	11	9	81.8182
astatham-gatk	INDEL	*	map_l100_m0_e0	hetalt	96.8750	93.9394	100.0000	91.2088	31	2	32	0	0
astatham-gatk	INDEL	*	map_l125_m0_e0	homalt	98.6014	99.2958	97.9167	88.3589	282	2	282	6	4	66.6667
astatham-gatk	INDEL	*	map_l125_m1_e0	hetalt	97.4359	95.0000	100.0000	92.4901	38	2	38	0	0
astatham-gatk	INDEL	*	map_l125_m2_e0	hetalt	97.5610	95.2381	100.0000	93.1507	40	2	40	0	0
astatham-gatk	INDEL	*	map_l150_m2_e1	hetalt	95.4545	91.3043	100.0000	95.3020	21	2	21	0	0
astatham-gatk	INDEL	*	map_l250_m0_e0	het	88.6957	96.2264	82.2581	97.8268	51	2	51	11	1	9.0909
astatham-gatk	INDEL	*	map_l250_m1_e0	homalt	97.7169	98.1651	97.2727	94.9192	107	2	107	3	2	66.6667
astatham-gatk	INDEL	*	map_l250_m2_e0	homalt	97.8355	98.2609	97.4138	95.3432	113	2	113	3	2	66.6667
astatham-gatk	INDEL	*	map_l250_m2_e1	homalt	97.8541	98.2759	97.4359	95.4333	114	2	114	3	2	66.6667
astatham-gatk	INDEL	*	segdup	homalt	99.4292	99.7917	99.0693	93.6623	958	2	958	9	8	88.8889
asubramanian-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	het	77.4194	75.0000	80.0000	92.1875	6	2	4	1	1	100.0000
asubramanian-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	hetalt	95.8333	92.0000	100.0000	44.4444	23	2	25	0	0
asubramanian-gatk	INDEL	D16_PLUS	map_l125_m0_e0	*	86.9565	83.3333	90.9091	97.9554	10	2	10	1	0	0.0000
asubramanian-gatk	INDEL	D16_PLUS	map_l125_m1_e0	het	90.0000	90.0000	90.0000	97.3545	18	2	18	2	0	0.0000

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