PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
40901-40950 / 86044 show all
gduggal-bwavardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
02000
gduggal-bwavardINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
0.0000
100.0000
02000
gduggal-bwavardINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
02000
gduggal-bwafbINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
93.3333
91.3043
95.4545
78.4314
2122111
100.0000
gduggal-bwafbINDELD16_PLUSmap_l125_m0_e0*
86.9565
83.3333
90.9091
90.9091
1021011
100.0000
gduggal-bwafbINDELD16_PLUSmap_l125_m2_e1hetalt
50.0000
100.0000
22000
gduggal-bwafbINDELD16_PLUSmap_l150_m2_e1hetalt
0.0000
100.0000
02000
gduggal-bwafbINDELD16_PLUSsegduphomalt
86.9565
83.3333
90.9091
94.1489
1021011
100.0000
gduggal-bwafbINDELD1_5func_cds*
98.7421
98.7421
98.7421
37.1542
157215721
50.0000
gduggal-bwafbINDELD1_5func_cdshomalt
98.6301
97.2973
100.0000
27.2727
7227200
gduggal-bwafbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
97.2222
94.5946
100.0000
90.6615
3522400
gduggal-bwafbINDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
91.6667
84.6154
100.0000
65.6250
1123300
gduggal-bwafbINDELD1_5segduphomalt
99.7207
99.4429
100.0000
94.9012
357235600
gduggal-bwafbINDELD6_15func_cdshomalt
90.9091
83.3333
100.0000
61.5385
1021000
gduggal-bwafbINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
57.1429
50.0000
66.6667
98.4211
22211
100.0000
gduggal-bwafbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
gduggal-bwafbINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
97.2973
97.2973
97.2973
81.9512
7227222
100.0000
gduggal-bwafbINDELD6_15map_l125_m1_e0hetalt
94.4444
89.4737
100.0000
90.6250
172300
gduggal-bwafbINDELD6_15map_l125_m1_e0homalt
95.5224
94.1176
96.9697
91.7085
3223211
100.0000
gduggal-bwafbINDELD6_15map_l125_m2_e0hetalt
94.4444
89.4737
100.0000
91.4286
172300
gduggal-bwafbINDELD6_15map_l125_m2_e0homalt
95.7746
94.4444
97.1429
91.7258
3423411
100.0000
gduggal-bwafbINDELD6_15map_l125_m2_e1homalt
95.8904
94.5946
97.2222
91.6473
3523511
100.0000
gduggal-bwafbINDELD6_15map_l150_m0_e0*
93.9335
93.7500
94.1176
92.9752
3023221
50.0000
gduggal-bwafbINDELD6_15map_l150_m1_e0het
96.3702
94.8718
97.9167
89.0411
3724710
0.0000
gduggal-bwafbINDELD6_15map_l150_m1_e0homalt
94.1176
92.3077
96.0000
92.3780
2422411
100.0000
gduggal-bwafbINDELD6_15map_l150_m2_e0homalt
94.5455
92.8571
96.2963
92.5000
2622611
100.0000
gduggal-bwafbINDELD6_15map_l150_m2_e1hetalt
87.5000
77.7778
100.0000
96.1538
72100
gduggal-bwafbINDELD6_15map_l150_m2_e1homalt
94.7368
93.1034
96.4286
92.3288
2722711
100.0000
gduggal-bwafbINDELD6_15map_l250_m1_e0*
91.4286
88.8889
94.1176
96.2306
1621610
0.0000
gduggal-bwafbINDELD6_15map_l250_m2_e0*
93.0233
90.9091
95.2381
95.9615
2022010
0.0000
gduggal-bwafbINDELD6_15map_l250_m2_e1*
93.0233
90.9091
95.2381
96.0452
2022010
0.0000
gduggal-bwafbINDELD6_15map_sirenhomalt
98.0843
98.4615
97.7099
87.2070
128212832
66.6667
gduggal-bwafbINDELD6_15tech_badpromoters*
90.9091
88.2353
93.7500
52.9412
1521511
100.0000
gduggal-bwafbINDELD6_15tech_badpromotershet
88.8889
80.0000
100.0000
52.6316
82900
gduggal-bwafbINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
0.0000
100.0000
02000
gduggal-bwafbINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
02000
gduggal-bwafbINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
0.0000
02000
gduggal-bwafbINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
100.0000
02000
gduggal-bwafbINDELI16_PLUSmap_l125_m1_e0homalt
50.0000
33.3333
100.0000
92.3077
12100
gduggal-bwafbINDELI16_PLUSmap_l125_m2_e0homalt
50.0000
33.3333
100.0000
93.3333
12100
gduggal-bwafbINDELI16_PLUSmap_l125_m2_e1homalt
50.0000
33.3333
100.0000
93.3333
12100
gduggal-bwafbINDELI16_PLUSmap_l150_m0_e0het
0.0000
100.0000
02000
gduggal-bwafbINDELI16_PLUSmap_l150_m1_e0hetalt
0.0000
100.0000
02000
gduggal-bwafbINDELI16_PLUSmap_l150_m1_e0homalt
50.0000
33.3333
100.0000
92.3077
12100
gduggal-bwafbINDELI16_PLUSmap_l150_m2_e0hetalt
0.0000
100.0000
02000
gduggal-bwafbINDELI16_PLUSmap_l150_m2_e0homalt
50.0000
33.3333
100.0000
93.3333
12100
gduggal-bwafbINDELI16_PLUSmap_l150_m2_e1hetalt
0.0000
100.0000
02000
gduggal-bwafbINDELI16_PLUSmap_l150_m2_e1homalt
50.0000
33.3333
100.0000
93.3333
12100
gduggal-bwafbINDELI16_PLUSsegduphetalt
66.6667
50.0000
100.0000
96.0000
22100