PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
40801-40850 / 86044 show all
eyeh-varpipeINDELD16_PLUSmap_l125_m2_e0hetalt
50.0000
33.3333
100.0000
94.4444
12100
eyeh-varpipeINDELD16_PLUSmap_l150_m1_e0het
88.8889
85.7143
92.3077
86.1702
1221211
100.0000
eyeh-varpipeINDELD16_PLUSmap_l150_m2_e0het
90.3226
87.5000
93.3333
85.7143
1421411
100.0000
eyeh-varpipeINDELD16_PLUSmap_l150_m2_e1het
90.3226
87.5000
93.3333
85.7143
1421411
100.0000
eyeh-varpipeINDELD16_PLUSmap_l150_m2_e1hetalt
0.0000
0.0000
100.0000
90.9091
02100
eyeh-varpipeINDELD16_PLUStech_badpromoters*
57.1429
50.0000
66.6667
40.0000
22211
100.0000
eyeh-varpipeINDELD16_PLUStech_badpromotershet
66.6667
50.0000
100.0000
50.0000
22200
eyeh-varpipeINDELD1_5func_cds*
98.4442
98.7421
98.1481
31.3559
157215932
66.6667
eyeh-varpipeINDELD1_5func_cdshomalt
98.6301
97.2973
100.0000
24.2105
7227200
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_diTR_51to200homalt
32.7901
97.1831
19.7222
22.4138
69271289266
92.0415
eyeh-varpipeINDELD1_5map_l150_m0_e0homalt
96.9096
97.6471
96.1832
92.2623
83212655
100.0000
eyeh-varpipeINDELD1_5map_l250_m0_e0*
95.1569
95.6522
94.6667
96.8867
4427141
25.0000
eyeh-varpipeINDELD1_5map_l250_m0_e0het
94.0849
93.9394
94.2308
96.2509
3124930
0.0000
eyeh-varpipeINDELD1_5map_l250_m1_e0het
96.8418
98.1982
95.5224
94.5946
109212861
16.6667
eyeh-varpipeINDELD1_5map_l250_m2_e0het
97.1032
98.3471
95.8904
94.6986
119214061
16.6667
eyeh-varpipeINDELD1_5map_l250_m2_e1het
97.1098
98.3607
95.8904
94.8006
120214061
16.6667
eyeh-varpipeINDELD1_5tech_badpromoters*
89.4737
89.4737
89.4737
42.4242
1721722
100.0000
eyeh-varpipeINDELD1_5tech_badpromotershetalt
0.0000
100.0000
02000
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
59.5745
66.6667
53.8462
93.8095
42766
100.0000
eyeh-varpipeINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
47.6190
50.0000
45.4545
94.3878
22566
100.0000
eyeh-varpipeINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
02000
eyeh-varpipeINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
38.3408
90.4762
24.3243
23.7113
192185655
98.2143
eyeh-varpipeINDELD6_15map_l125_m0_e0homalt
81.0811
83.3333
78.9474
93.0909
1021544
100.0000
eyeh-varpipeINDELD6_15map_l125_m1_e0het
93.2430
96.8750
89.8734
86.2609
6227188
100.0000
eyeh-varpipeINDELD6_15map_l250_m1_e0*
92.1466
88.8889
95.6522
95.5684
1622211
100.0000
eyeh-varpipeINDELD6_15map_l250_m1_e0hetalt
0.0000
0.0000
100.0000
95.5556
02200
eyeh-varpipeINDELD6_15map_l250_m2_e0hetalt
0.0000
0.0000
100.0000
95.7447
02200
eyeh-varpipeINDELD6_15map_l250_m2_e1hetalt
0.0000
0.0000
100.0000
95.8333
02200
eyeh-varpipeINDELD6_15tech_badpromoters*
93.7500
88.2353
100.0000
52.9412
1521600
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200het
0.0000
100.0000
02000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
100.0000
50.0000
02100
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
60.0000
50.0000
75.0000
60.0000
221244
100.0000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
0.0000
02000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
02000
eyeh-varpipeINDELI16_PLUSmap_l125_m1_e0homalt
44.4444
33.3333
66.6667
78.5714
12211
100.0000
eyeh-varpipeINDELI16_PLUSmap_l125_m2_e0homalt
44.4444
33.3333
66.6667
81.2500
12211
100.0000
eyeh-varpipeINDELI16_PLUSmap_l125_m2_e1homalt
44.4444
33.3333
66.6667
82.3529
12211
100.0000
eyeh-varpipeINDELI16_PLUSmap_l150_m0_e0het
0.0000
0.0000
100.0000
87.5000
02100
eyeh-varpipeINDELI16_PLUSmap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
02000
eyeh-varpipeINDELI16_PLUSmap_l150_m1_e0homalt
40.0000
33.3333
50.0000
84.6154
12111
100.0000
eyeh-varpipeINDELI16_PLUSmap_l150_m2_e0hetalt
0.0000
0.0000
0.0000
02000
eyeh-varpipeINDELI16_PLUSmap_l150_m2_e0homalt
44.4444
33.3333
66.6667
80.0000
12211
100.0000
eyeh-varpipeINDELI16_PLUSmap_l150_m2_e1hetalt
0.0000
0.0000
0.0000
02000
eyeh-varpipeINDELI16_PLUSmap_l150_m2_e1homalt
44.4444
33.3333
66.6667
81.2500
12211
100.0000
eyeh-varpipeINDELI16_PLUStech_badpromoters*
57.1429
50.0000
66.6667
40.0000
22211
100.0000
eyeh-varpipeINDELI1_5func_cds*
98.6417
98.8889
98.3957
28.6260
178218432
66.6667
eyeh-varpipeINDELI1_5map_l100_m0_e0hetalt
85.5305
77.7778
95.0000
91.5966
721911
100.0000
eyeh-varpipeINDELI1_5map_l100_m0_e0homalt
98.4417
99.0385
97.8520
84.2540
206241098
88.8889
eyeh-varpipeINDELI1_5map_l150_m0_e0het
97.5684
98.1132
97.0297
89.2267
104219663
50.0000