PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
85151-85200 / 86044 show all
eyeh-varpipeINDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
96.7532
40500
eyeh-varpipeINDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.2603
20400
eyeh-varpipeINDELD6_15map_l250_m1_e0het
100.0000
100.0000
100.0000
95.2000
1101200
eyeh-varpipeINDELD6_15map_l250_m1_e0homalt
94.1176
100.0000
88.8889
95.9821
50811
100.0000
eyeh-varpipeINDELD6_15map_l250_m2_e0het
96.7742
100.0000
93.7500
94.3662
1401511
100.0000
eyeh-varpipeINDELD6_15map_l250_m2_e1het
96.7742
100.0000
93.7500
94.4828
1401511
100.0000
eyeh-varpipeINDELD6_15segdupwithalt*
0.0000
0.0000
100.0000
99.9434
00100
eyeh-varpipeINDELD6_15segdupwithalthet
0.0000
0.0000
100.0000
99.8880
00100
eyeh-varpipeINDELD6_15segdupwithalthetalt
0.0000
100.0000
00000
eyeh-varpipeINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
eyeh-varpipeINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.3333
60700
eyeh-varpipeINDELI16_PLUSdecoy*
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSdecoyhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
60.0000
20200
eyeh-varpipeINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
25.0000
00032
66.6667
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
0.0000
33.3333
94.7368
00122
100.0000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
100.0000
96.4286
00100
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
90.4762
00022
100.0000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
0.0000
00054
80.0000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELI16_PLUSmap_l150_m0_e0homalt
100.0000
100.0000
100.0000
88.8889
10100
eyeh-varpipeINDELI16_PLUSmap_l250_m0_e0*
0.0000
100.0000
00000