PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
85051-85100 / 86044 show all
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUSmap_l125_m0_e0homalt
80.0000
100.0000
66.6667
94.1176
20211
100.0000
eyeh-varpipeINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELD16_PLUSmap_l150_m0_e0homalt
0.0000
100.0000
00000
eyeh-varpipeINDELD16_PLUSmap_l150_m1_e0homalt
0.0000
0.0000
98.3871
00011
100.0000
eyeh-varpipeINDELD16_PLUSmap_l150_m2_e0homalt
0.0000
0.0000
98.4848
00011
100.0000
eyeh-varpipeINDELD16_PLUSmap_l150_m2_e1homalt
0.0000
0.0000
98.5075
00011
100.0000
eyeh-varpipeINDELD16_PLUSmap_l250_m0_e0*
100.0000
100.0000
100.0000
98.1132
10100
eyeh-varpipeINDELD16_PLUSmap_l250_m0_e0het
100.0000
100.0000
100.0000
96.2963
10100
eyeh-varpipeINDELD16_PLUSmap_l250_m0_e0hetalt
0.0000
100.0000
00000
eyeh-varpipeINDELD16_PLUSmap_l250_m0_e0homalt
0.0000
100.0000
00000
eyeh-varpipeINDELD16_PLUSmap_l250_m1_e0het
100.0000
100.0000
100.0000
93.3333
30300
eyeh-varpipeINDELD16_PLUSmap_l250_m1_e0homalt
0.0000
0.0000
97.2222
00011
100.0000
eyeh-varpipeINDELD16_PLUSmap_l250_m2_e0het
100.0000
100.0000
100.0000
93.7500
30300
eyeh-varpipeINDELD16_PLUSmap_l250_m2_e0homalt
66.6667
100.0000
50.0000
95.0000
10111
100.0000
eyeh-varpipeINDELD16_PLUSmap_l250_m2_e1het
100.0000
100.0000
100.0000
93.7500
30300
eyeh-varpipeINDELD16_PLUSmap_l250_m2_e1homalt
66.6667
100.0000
50.0000
95.1220
10111
100.0000
eyeh-varpipeINDELD16_PLUSsegdupwithalt*
0.0000
100.0000
00000
eyeh-varpipeINDELD16_PLUSsegdupwithalthet
0.0000
100.0000
00000
eyeh-varpipeINDELD16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
eyeh-varpipeINDELD16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
eyeh-varpipeINDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD16_PLUStech_badpromotershomalt
0.0000
0.0000
0.0000
00011
100.0000
eyeh-varpipeINDELD1_5decoy*
96.0000
100.0000
92.3077
99.7796
401211
100.0000
eyeh-varpipeINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.8141
20700
eyeh-varpipeINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6732
10100
eyeh-varpipeINDELD1_5decoyhomalt
88.8889
100.0000
80.0000
99.7263
10411
100.0000
eyeh-varpipeINDELD1_5func_cdshet
98.3051
100.0000
96.6667
34.3066
8508732
66.6667
eyeh-varpipeINDELD1_5func_cdshetalt
0.0000
100.0000
00000
eyeh-varpipeINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7013
10100
eyeh-varpipeINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
86.9565
100.0000
76.9231
97.6059
201033
100.0000
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
94.5455
100.0000
89.6552
98.1931
1002633
100.0000
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.5075
701500
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.5915
10100
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
86.9565
100.0000
76.9231
97.5425
201033
100.0000
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
eyeh-varpipeINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
eyeh-varpipeINDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000