PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
83551-83600 / 86044 show all
gduggal-bwavardINDELI6_15lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI6_15lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI6_15map_l125_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI6_15map_l150_m0_e0het
53.3333
100.0000
36.3636
94.5545
40473
42.8571
gduggal-bwavardINDELI6_15map_l150_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI6_15map_l150_m1_e0het
75.0000
100.0000
60.0000
93.7028
15015104
40.0000
gduggal-bwavardINDELI6_15map_l150_m2_e0het
75.0000
100.0000
60.0000
94.4812
15015104
40.0000
gduggal-bwavardINDELI6_15map_l150_m2_e1het
76.1905
100.0000
61.5385
94.4444
16016104
40.0000
gduggal-bwavardINDELI6_15map_l250_m0_e0*
40.0000
100.0000
25.0000
96.8504
10130
0.0000
gduggal-bwavardINDELI6_15map_l250_m0_e0het
0.0000
0.0000
97.3214
00030
0.0000
gduggal-bwavardINDELI6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
93.3333
10100
gduggal-bwavardINDELI6_15map_l250_m1_e0het
61.5385
100.0000
44.4444
96.2185
40452
40.0000
gduggal-bwavardINDELI6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI6_15map_l250_m2_e0het
66.6667
100.0000
50.0000
96.1538
50552
40.0000
gduggal-bwavardINDELI6_15map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI6_15map_l250_m2_e1het
66.6667
100.0000
50.0000
96.2825
50552
40.0000
gduggal-bwavardINDELI6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI6_15segdupwithalt*
0.0000
100.0000
00000
gduggal-bwavardINDELI6_15segdupwithalthet
0.0000
100.0000
00000
gduggal-bwavardINDELI6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwavardINDELI6_15tech_badpromotershet
77.7778
100.0000
63.6364
62.0690
70744
100.0000
gduggal-bwavardSNP*decoy*
0.0000
0.0000
100.0000
99.9992
00200
gduggal-bwavardSNP*decoyhet
0.0000
100.0000
00000
gduggal-bwavardSNP*decoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*decoyhomalt
0.0000
0.0000
100.0000
99.9933
00200
gduggal-bwavardSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000