PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
83401-83450 / 86044 show all
gduggal-bwaplatSNPtvdecoy*
0.0000
100.0000
00000
gduggal-bwaplatSNPtvdecoyhet
0.0000
100.0000
00000
gduggal-bwaplatSNPtvdecoyhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvdecoyhomalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
87.5000
10100
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
77.2727
50500
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
99.1935
10100
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
99.0385
10100
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvsegduphetalt
100.0000
100.0000
100.0000
98.1771
70700
gduggal-bwaplatSNPtvsegdupwithalt*
0.0000
100.0000
00000
gduggal-bwaplatSNPtvsegdupwithalthet
0.0000
100.0000
00000
gduggal-bwaplatSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9255
30200
gduggal-bwavardINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
77.4194
100.0000
63.1579
99.6078
1201275
71.4286
gduggal-bwavardINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
76.9231
100.0000
62.5000
99.6580
1001064
66.6667