PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
83351-83400 / 86044 show all
gduggal-bwaplatSNP*segdupwithalt*
0.0000
100.0000
00000
gduggal-bwaplatSNP*segdupwithalthet
0.0000
100.0000
00000
gduggal-bwaplatSNP*segdupwithalthetalt
0.0000
100.0000
00000
gduggal-bwaplatSNP*segdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwaplatSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtidecoy*
0.0000
100.0000
00000
gduggal-bwaplatSNPtidecoyhet
0.0000
100.0000
00000
gduggal-bwaplatSNPtidecoyhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtidecoyhomalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
75.0000
10100
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
66.6667
10100
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
83.3333
20200
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
66.6667
10100
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwaplatSNPtilowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtisegduphetalt
100.0000
100.0000
100.0000
99.1667
20200
gduggal-bwaplatSNPtisegdupwithalt*
0.0000
100.0000
00000
gduggal-bwaplatSNPtisegdupwithalthet
0.0000
100.0000
00000
gduggal-bwaplatSNPtisegdupwithalthetalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtisegdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwaplatSNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000