PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
82701-82750 / 86044 show all
gduggal-bwavardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
93.3333
100.0000
87.5000
99.5874
70711
100.0000
gduggal-bwavardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.8636
10100
gduggal-bwavardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7342
10100
gduggal-bwavardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
0.0000
80.0000
99.9773
001643
75.0000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
0.0000
100.0000
99.9800
00300
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5map_l250_m0_e0het
69.4737
100.0000
53.2258
97.1702
33033292
6.8966
gduggal-bwavardINDELD1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9948
10100
gduggal-bwavardINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9937
10100
gduggal-bwavardINDELD1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwavardINDELD1_5tech_badpromotershet
69.5652
100.0000
53.3333
51.6129
80876
85.7143
gduggal-bwavardINDELD6_15decoyhet
0.0000
0.0000
99.8893
00021
50.0000
gduggal-bwavardINDELD6_15decoyhomalt
0.0000
100.0000
00000
gduggal-bwavardINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
97.9866
30333
100.0000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
98.5455
20222
100.0000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
91.6667
10111
100.0000
gduggal-bwavardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELD6_15map_l100_m0_e0het
81.3793
100.0000
68.6047
92.0591
600592720
74.0741
gduggal-bwavardINDELD6_15map_l125_m0_e0het
81.6901
100.0000
69.0476
94.4591
29029138
61.5385
gduggal-bwavardINDELD6_15map_l150_m0_e0het
78.4314
100.0000
64.5161
94.8074
20020117
63.6364
gduggal-bwavardINDELD6_15map_l150_m1_e0het
84.7826
100.0000
73.5849
94.5697
390391410
71.4286
gduggal-bwavardINDELD6_15map_l150_m2_e0het
86.7925
100.0000
76.6667
94.4954
460461410
71.4286