PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
81151-81200 / 86044 show all
gduggal-snapfbINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9690
20200
gduggal-snapfbINDELD1_5decoyhetalt
100.0000
100.0000
10000
gduggal-snapfbINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9493
10100
gduggal-snapfbINDELD1_5func_cdshetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
10000
gduggal-snapfbINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.6805
20200
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.4104
1001000
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.2467
70800
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
10000
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.6678
20200
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
70.2703
100.0000
54.1667
50.0000
13013117
63.6364
gduggal-snapfbINDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.0588
30300
gduggal-snapfbINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.3333
20200
gduggal-snapfbINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
98.5635
1301300
gduggal-snapfbINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9941
10100
gduggal-snapfbINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9904
10100
gduggal-snapfbINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5tech_badpromotershomalt
94.7368
100.0000
90.0000
47.3684
90911
100.0000
gduggal-snapfbINDELD6_15decoy*
100.0000
100.0000
100.0000
99.7685
10100
gduggal-snapfbINDELD6_15decoyhet
0.0000
0.0000
100.0000
99.6656
00100
gduggal-snapfbINDELD6_15decoyhetalt
100.0000
100.0000
10000
gduggal-snapfbINDELD6_15decoyhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
95.5556
20200
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15segdupwithalt*
0.0000
100.0000
00000
gduggal-snapfbINDELD6_15segdupwithalthet
0.0000
100.0000
00000