PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1604 1605 1606 1607 1608 1609 1610 1611 1612 ... 1720 1721 » 80351-80400 / 86044 show all
gduggal-snapvard	SNP	ti	decoy	*	0.0000	0.0000	100.0000	99.9986	0	0	2	0	0
gduggal-snapvard	SNP	ti	decoy	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	decoy	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	decoy	homalt	0.0000	0.0000	100.0000	99.9896	0	0	2	0	0
gduggal-snapvard	SNP	ti	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_diTR_11to50	hetalt	0.0000	100.0000	0.0000	0.0000	1	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_diTR_51to200	homalt	70.5882	100.0000	54.5455	95.9410	6	0	6	5	0	0.0000
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_diTR_gt200	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_diTR_gt200	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_diTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_diTR_gt200	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_quadTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	98.7500	2	0	1	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_triTR_gt200	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_triTR_gt200	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_triTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	lowcmp_SimpleRepeat_triTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	SNP	ti	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	SNP	tv	decoy	*	0.0000	0.0000	100.0000	99.9988	0	0	1	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge