PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
80151-80200 / 86044 show all
gduggal-snapvardINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapvardINDELD1_5map_l125_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
gduggal-snapvardINDELD1_5map_l150_m0_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
gduggal-snapvardINDELD1_5map_l250_m0_e0*
74.2857
100.0000
59.0909
96.7105
46065458
17.7778
gduggal-snapvardINDELD1_5map_l250_m0_e0het
68.9655
100.0000
52.6316
96.7037
33050458
17.7778
gduggal-snapvardINDELD1_5map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.7532
1301500
gduggal-snapvardINDELD1_5map_l250_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
gduggal-snapvardINDELD1_5map_l250_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
30000
gduggal-snapvardINDELD1_5map_l250_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
30000
gduggal-snapvardINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9955
10100
gduggal-snapvardINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9947
10100
gduggal-snapvardINDELD1_5segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
gduggal-snapvardINDELD6_15decoyhet
0.0000
0.0000
50.0000
99.7998
00110
0.0000
gduggal-snapvardINDELD6_15decoyhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
80.0000
100.0000
66.6667
98.5075
20210
0.0000
gduggal-snapvardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15segdupwithalt*
0.0000
100.0000
00000
gduggal-snapvardINDELD6_15segdupwithalthet
0.0000
100.0000
00000
gduggal-snapvardINDELD6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
gduggal-snapvardINDELD6_15tech_badpromotershetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapvardINDELI16_PLUSdecoy*
0.0000
100.0000
00000
gduggal-snapvardINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
gduggal-snapvardINDELI16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
0.0000
00000