PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1584 1585 1586 1587 1588 1589 1590 1591 1592 ... 1720 1721 » 79351-79400 / 86044 show all
gduggal-snapvard	INDEL	C16_PLUS	map_l150_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l150_m2_e0	*	0.0000	0.0000	100.0000	92.8571	0	0	1	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l150_m2_e0	het	0.0000	0.0000	100.0000	91.6667	0	0	1	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l150_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l150_m2_e0	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l150_m2_e1	*	0.0000	0.0000	100.0000	92.8571	0	0	1	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l150_m2_e1	het	0.0000	0.0000	100.0000	91.6667	0	0	1	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l150_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l150_m2_e1	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m0_e0	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m0_e0	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m1_e0	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m1_e0	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m2_e0	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m2_e0	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m2_e0	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m2_e1	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m2_e1	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_l250_m2_e1	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_siren	*	0.0000	0.0000	100.0000	97.2973	0	0	1	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_siren	het	0.0000	0.0000	100.0000	97.2222	0	0	1	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_siren	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	map_siren	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	segdup	*	0.0000	0.0000	50.0000	93.7500	0	0	1	1	0	0.0000
gduggal-snapvard	INDEL	C16_PLUS	segdup	het	0.0000	0.0000	50.0000	93.1034	0	0	1	1	0	0.0000
gduggal-snapvard	INDEL	C16_PLUS	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	segdup	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	tech_badpromoters	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	tech_badpromoters	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C16_PLUS	tech_badpromoters	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C1_5	*	het	54.5455	100.0000	37.5000	88.8932	9	0	2265	3775	369	9.7748
gduggal-snapvard	INDEL	C1_5	*	homalt	0.0000	0.0000	93.2755	88.9976	0	0	860	62	31	50.0000
gduggal-snapvard	INDEL	C1_5	HG002complexvar	*	81.4638	100.0000	68.7248	77.2577	7	0	3072	1398	373	26.6810
gduggal-snapvard	INDEL	C1_5	HG002complexvar	het	76.5611	100.0000	62.0235	78.1252	7	0	2213	1355	344	25.3875
gduggal-snapvard	INDEL	C1_5	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	C1_5	HG002complexvar	homalt	0.0000	0.0000	95.2328	73.0263	0	0	859	43	29	67.4419
gduggal-snapvard	INDEL	C1_5	HG002compoundhet	het	0.0000	0.0000	29.6193	80.5174	0	0	319	758	106	13.9842
gduggal-snapvard	INDEL	C1_5	HG002compoundhet	homalt	0.0000	0.0000	57.8947	87.4172	0	0	11	8	5	62.5000
gduggal-snapvard	INDEL	C1_5	decoy	*		0.0000	0.0000	99.9756	0	0	0	1	0	0.0000

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge