PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
72401-72450 / 86044 show all
hfeng-pmm3INDELD6_15map_l150_m1_e0het
100.0000
100.0000
100.0000
92.5144
3903900
hfeng-pmm3INDELD6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
89.8734
80800
hfeng-pmm3INDELD6_15map_l150_m2_e0het
100.0000
100.0000
100.0000
92.0690
4604600
hfeng-pmm3INDELD6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
91.2088
80800
hfeng-pmm3INDELD6_15map_l150_m2_e1het
100.0000
100.0000
100.0000
92.0875
4704700
hfeng-pmm3INDELD6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
97.5000
60600
hfeng-pmm3INDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
97.4684
40400
hfeng-pmm3INDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
hfeng-pmm3INDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.7213
20200
hfeng-pmm3INDELD6_15map_l250_m1_e0*
100.0000
100.0000
100.0000
95.8716
1801800
hfeng-pmm3INDELD6_15map_l250_m1_e0het
100.0000
100.0000
100.0000
96.2199
1101100
hfeng-pmm3INDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
95.6522
20200
hfeng-pmm3INDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
94.9495
50500
hfeng-pmm3INDELD6_15map_l250_m2_e0*
100.0000
100.0000
100.0000
95.7115
2202200
hfeng-pmm3INDELD6_15map_l250_m2_e0het
100.0000
100.0000
100.0000
95.8944
1401400
hfeng-pmm3INDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.4912
20200
hfeng-pmm3INDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
94.7826
60600
hfeng-pmm3INDELD6_15map_l250_m2_e1*
100.0000
100.0000
100.0000
95.8175
2202200
hfeng-pmm3INDELD6_15map_l250_m2_e1het
100.0000
100.0000
100.0000
96.0114
1401400
hfeng-pmm3INDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.5517
20200
hfeng-pmm3INDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
94.8718
60600
hfeng-pmm3INDELD6_15segduphomalt
99.0099
100.0000
98.0392
91.6938
5005011
100.0000
hfeng-pmm3INDELD6_15segdupwithalt*
0.0000
100.0000
00000
hfeng-pmm3INDELD6_15segdupwithalthet
0.0000
100.0000
00000
hfeng-pmm3INDELD6_15segdupwithalthetalt
0.0000
100.0000
00000
hfeng-pmm3INDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
hfeng-pmm3INDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
hfeng-pmm3INDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
60600
hfeng-pmm3INDELI16_PLUSHG002complexvarhomalt
99.0385
100.0000
98.0952
69.9140
309030965
83.3333
hfeng-pmm3INDELI16_PLUSHG002compoundhethomalt
12.0000
100.0000
6.3830
77.2947
3034443
97.7273
hfeng-pmm3INDELI16_PLUSdecoy*
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSdecoyhet
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSdecoyhetalt
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
57.1429
90900
hfeng-pmm3INDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
88.8889
20200
hfeng-pmm3INDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
94.3396
100.0000
89.2857
91.8605
2502532
66.6667
hfeng-pmm3INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
96.4427
100.0000
93.1298
85.5088
122012299
100.0000
hfeng-pmm3INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
1802000
hfeng-pmm3INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
91.3043
2402400
hfeng-pmm3INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm3INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
76.7296
3503700
hfeng-pmm3INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
84.0183
3503500