PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
70801-70850 / 86044 show all
jlack-gatkINDELC6_15map_l150_m2_e1*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l150_m2_e1het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l150_m2_e1hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l150_m2_e1homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m0_e0*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m0_e0het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m0_e0homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m1_e0*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m1_e0het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m1_e0homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e0*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e0het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e0homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e1*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e1het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e1homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_siren*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_sirenhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_sirenhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_sirenhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segdup*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segduphet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segduphetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segduphomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segdupwithalt*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segdupwithalthet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segdupwithalthomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELD16_PLUSHG002compoundhethomalt
55.1724
100.0000
38.0952
66.6667
8081313
100.0000
jlack-gatkINDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.5617
60600
jlack-gatkINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.6451
40400
jlack-gatkINDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
jlack-gatkINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
99.0654
20200
jlack-gatkINDELD16_PLUSfunc_cds*
96.0000
100.0000
92.3077
81.9444
1201210
0.0000
jlack-gatkINDELD16_PLUSfunc_cdshet
94.1176
100.0000
88.8889
84.7458
80810
0.0000
jlack-gatkINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
69.2308
40400
jlack-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8224
10100
jlack-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.3333
10100
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8172
10100
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.3077
10100
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000