PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
70251-70300 / 86044 show all
jlack-gatkINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
jlack-gatkINDEL*map_l250_m0_e0homalt
98.0392
100.0000
96.1538
97.3604
2502511
100.0000
jlack-gatkINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9981
10100
jlack-gatkINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9975
10100
jlack-gatkINDEL*segdupwithalthetalt
0.0000
100.0000
00000
jlack-gatkINDEL*segdupwithalthomalt
0.0000
100.0000
00000
jlack-gatkINDEL*tech_badpromoters*
98.7013
100.0000
97.4359
53.2934
7607620
0.0000
jlack-gatkINDEL*tech_badpromotershet
97.5000
100.0000
95.1220
50.6024
3903920
0.0000
jlack-gatkINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
jlack-gatkINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
56.5789
3303300
jlack-gatkINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000