PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
61051-61100 / 86044 show all
ckim-dragenINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
ckim-dragenINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
ckim-dragenINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
47.0588
90900
ckim-dragenINDELD6_15HG002compoundhethomalt
12.7321
100.0000
6.7989
76.0353
24024329328
99.6960
ckim-dragenINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9525
10100
ckim-dragenINDELD6_15decoyhet
0.0000
100.0000
00000
ckim-dragenINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.0654
10100
ckim-dragenINDELD6_15decoyhomalt
0.0000
100.0000
00000
ckim-dragenINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
ckim-dragenINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
60.0000
1201200
ckim-dragenINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.2973
60600
ckim-dragenINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.9730
30300
ckim-dragenINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.4762
20200
ckim-dragenINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.1132
10100
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.9899
40400
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.5185
20200
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
86.6667
20200
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.9133
100.0000
99.8267
69.4709
576057610
0.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8974
100.0000
99.7951
67.6178
487048710
0.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.5646
100.0000
99.1329
58.6124
343034332
66.6667
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
91.3043
20200
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
92.3077
10100
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
75.0000
10100
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_diTR_51to200homalt
70.6140
100.0000
54.5763
33.4086
1610161134134
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.6785
100.0000
99.3590
84.8984
155015510
0.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.6291
7407400
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.1115
90900
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.8705
60600
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
97.4619
100.0000
95.0495
45.1087
1920192109
90.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
36.3636
2102100
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15map_l150_m0_e0het
95.2381
100.0000
90.9091
94.3005
2002020
0.0000
ckim-dragenINDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
86.8421
50500
ckim-dragenINDELD6_15map_l150_m1_e0het
97.5000
100.0000
95.1220
93.8806
3903920
0.0000
ckim-dragenINDELD6_15map_l150_m2_e0het
97.8723
100.0000
95.8333
93.8303
4604620
0.0000
ckim-dragenINDELD6_15map_l150_m2_e1het
97.9167
100.0000
95.9184
93.8826
4704720
0.0000
ckim-dragenINDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
98.0488
40400
ckim-dragenINDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-dragenINDELD6_15map_l250_m1_e0het
95.6522
100.0000
91.6667
96.8085
1101110
0.0000
ckim-dragenINDELD6_15map_l250_m2_e0het
96.5517
100.0000
93.3333
96.6443
1401410
0.0000
ckim-dragenINDELD6_15map_l250_m2_e1het
96.5517
100.0000
93.3333
96.7742
1401410
0.0000