PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
60301-60350 / 86044 show all | |||||||||||||||
| cchapple-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 2 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 0.0000 | 50.0000 | 0 | 0 | 0 | 1 | 1 | 100.0000 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l100_m0_e0 | * | 96.0000 | 100.0000 | 92.3077 | 95.6954 | 11 | 0 | 12 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l100_m0_e0 | het | 95.2381 | 100.0000 | 90.9091 | 94.0860 | 8 | 0 | 10 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l100_m0_e0 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 1 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l100_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.2759 | 2 | 0 | 2 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l100_m1_e0 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 3 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l100_m1_e0 | homalt | 90.9091 | 100.0000 | 83.3333 | 96.2500 | 5 | 0 | 5 | 1 | 1 | 100.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l100_m2_e0 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 3 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l100_m2_e0 | homalt | 90.9091 | 100.0000 | 83.3333 | 96.7033 | 5 | 0 | 5 | 1 | 1 | 100.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l100_m2_e1 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 3 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l100_m2_e1 | homalt | 90.9091 | 100.0000 | 83.3333 | 96.7213 | 5 | 0 | 5 | 1 | 1 | 100.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l125_m0_e0 | * | 93.3333 | 100.0000 | 87.5000 | 96.8254 | 6 | 0 | 7 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l125_m0_e0 | het | 90.9091 | 100.0000 | 83.3333 | 95.9459 | 3 | 0 | 5 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l125_m0_e0 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 1 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l125_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.0769 | 2 | 0 | 2 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l125_m1_e0 | * | 96.9697 | 100.0000 | 94.1176 | 95.6633 | 15 | 0 | 16 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l125_m1_e0 | het | 96.2963 | 100.0000 | 92.8571 | 94.4664 | 9 | 0 | 13 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l125_m1_e0 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 3 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l125_m1_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.8417 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l125_m2_e0 | * | 96.9697 | 100.0000 | 94.1176 | 96.2138 | 15 | 0 | 16 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l125_m2_e0 | het | 96.2963 | 100.0000 | 92.8571 | 95.2703 | 9 | 0 | 13 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l125_m2_e0 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 3 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l125_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.0392 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l125_m2_e1 | * | 96.9697 | 100.0000 | 94.1176 | 96.2555 | 15 | 0 | 16 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l125_m2_e1 | het | 96.2963 | 100.0000 | 92.8571 | 95.3333 | 9 | 0 | 13 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l125_m2_e1 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 3 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l125_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.0519 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m0_e0 | * | 90.9091 | 100.0000 | 83.3333 | 97.3094 | 4 | 0 | 5 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l150_m0_e0 | het | 88.8889 | 100.0000 | 80.0000 | 96.1538 | 2 | 0 | 4 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 1 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m0_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 98.9247 | 1 | 0 | 1 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m1_e0 | * | 96.0000 | 100.0000 | 92.3077 | 96.0486 | 11 | 0 | 12 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l150_m1_e0 | het | 94.7368 | 100.0000 | 90.0000 | 95.0980 | 6 | 0 | 9 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l150_m1_e0 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 2 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m1_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.6000 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m2_e0 | * | 96.0000 | 100.0000 | 92.3077 | 96.4481 | 11 | 0 | 12 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l150_m2_e0 | het | 94.7368 | 100.0000 | 90.0000 | 95.6710 | 6 | 0 | 9 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l150_m2_e0 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 2 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m2_e0 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.7778 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m2_e1 | * | 96.0000 | 100.0000 | 92.3077 | 96.4865 | 11 | 0 | 12 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l150_m2_e1 | het | 94.7368 | 100.0000 | 90.0000 | 95.7265 | 6 | 0 | 9 | 1 | 0 | 0.0000 | |
| cchapple-custom | INDEL | I16_PLUS | map_l150_m2_e1 | hetalt | 0.0000 | 100.0000 | 0.0000 | 0.0000 | 2 | 0 | 0 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l150_m2_e1 | homalt | 100.0000 | 100.0000 | 100.0000 | 97.7941 | 3 | 0 | 3 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m0_e0 | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m0_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m1_e0 | * | 100.0000 | 100.0000 | 100.0000 | 99.5413 | 1 | 0 | 1 | 0 | 0 | ||
| cchapple-custom | INDEL | I16_PLUS | map_l250_m1_e0 | het | 100.0000 | 100.0000 | 100.0000 | 99.1667 | 1 | 0 | 1 | 0 | 0 | ||