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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1118 1119 1120 1121 1122 1123 1124 1125 1126 ... 1720 1721 » 56051-56100 / 86044 show all
ckim-vqsr	INDEL	D6_15	map_l150_m0_e0	homalt	100.0000	100.0000	100.0000	95.0704	7	0	7	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	91.8367	8	0	8	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	92.7928	8	0	8	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	*	100.0000	100.0000	100.0000	98.5782	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	het	100.0000	100.0000	100.0000	98.7179	4	0	4	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	97.4684	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	*	100.0000	100.0000	100.0000	97.7011	18	0	18	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	het	100.0000	100.0000	100.0000	98.1034	11	0	11	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	96.6667	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m1_e0	homalt	100.0000	100.0000	100.0000	96.5035	5	0	5	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	*	100.0000	100.0000	100.0000	97.5637	22	0	22	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	het	100.0000	100.0000	100.0000	97.8979	14	0	14	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	97.2973	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e0	homalt	100.0000	100.0000	100.0000	96.3190	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	*	100.0000	100.0000	100.0000	97.6293	22	0	22	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	het	100.0000	100.0000	100.0000	97.9622	14	0	14	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	97.3333	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	map_l250_m2_e1	homalt	100.0000	100.0000	100.0000	96.3855	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	segdup	homalt	96.1538	100.0000	92.5926	92.3944	50	0	50	4	4	100.0000
ckim-vqsr	INDEL	D6_15	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	*	100.0000	100.0000	100.0000	51.4286	17	0	17	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	het	100.0000	100.0000	100.0000	52.3810	10	0	10	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	tech_badpromoters	homalt	100.0000	100.0000	100.0000	53.8462	6	0	6	0	0
ckim-vqsr	INDEL	I16_PLUS	HG002complexvar	homalt	98.8800	100.0000	97.7848	70.4673	309	0	309	7	7	100.0000
ckim-vqsr	INDEL	I16_PLUS	HG002compoundhet	homalt	8.3333	100.0000	4.3478	72.9412	3	0	3	66	66	100.0000
ckim-vqsr	INDEL	I16_PLUS	decoy	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	het	100.0000	100.0000	100.0000	70.0000	9	0	9	0	0
ckim-vqsr	INDEL	I16_PLUS	func_cds	homalt	100.0000	100.0000	100.0000	88.2353	2	0	2	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	96.1538	100.0000	92.5926	92.7224	25	0	25	2	2	100.0000
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	91.9732	24	0	24	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	85.1695	35	0	35	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	100.0000	100.0000	100.0000	76.0181	53	0	53	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	83.1579	16	0	16	0	0
ckim-vqsr	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	50.0000	100.0000	33.3333	95.0820	1	0	1	2	2	100.0000

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