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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1117 1118 1119 1120 1121 1122 1123 1124 1125 ... 1720 1721 » 56001-56050 / 86044 show all
ckim-vqsr	INDEL	D1_5	map_l250_m0_e0	het	84.6154	100.0000	73.3333	98.2353	33	0	33	12	0	0.0000
ckim-vqsr	INDEL	D1_5	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	97.5000	13	0	13	0	0
ckim-vqsr	INDEL	D1_5	segdup	homalt	99.7222	100.0000	99.4460	94.5493	359	0	359	2	2	100.0000
ckim-vqsr	INDEL	D1_5	segdupwithalt	*	100.0000	100.0000	100.0000	99.9960	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	segdupwithalt	het	100.0000	100.0000	100.0000	99.9946	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
ckim-vqsr	INDEL	D1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	43.7500	9	0	9	0	0
ckim-vqsr	INDEL	D6_15	HG002compoundhet	homalt	27.2727	100.0000	15.7895	71.2121	24	0	24	128	127	99.2188
ckim-vqsr	INDEL	D6_15	decoy	*	100.0000	100.0000	100.0000	99.9554	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	decoy	hetalt	100.0000	100.0000	100.0000	99.2647	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	func_cds	*	100.0000	100.0000	100.0000	56.5657	43	0	43	0	0
ckim-vqsr	INDEL	D6_15	func_cds	het	100.0000	100.0000	100.0000	53.9683	29	0	29	0	0
ckim-vqsr	INDEL	D6_15	func_cds	hetalt	100.0000	100.0000	100.0000	60.0000	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	func_cds	homalt	100.0000	100.0000	100.0000	61.2903	12	0	12	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	97.1831	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	97.8873	3	0	3	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	98.0769	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	77.7778	43	0	43	1	1	100.0000
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	97.8723	4	0	4	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.4252	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	84.6154	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.8665	100.0000	99.7333	59.5032	374	0	374	1	0	0.0000
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8974	100.0000	99.7951	68.0419	487	0	487	1	1	100.0000
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8544	100.0000	99.7093	57.2671	343	0	343	1	0	0.0000
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	92.0000	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	93.3333	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	75.0000	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	100.0000	100.0000	100.0000	85.2381	155	0	155	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	100.0000	100.0000	100.0000	82.3810	74	0	74	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.1788	9	0	9	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	100.0000	100.0000	100.0000	99.8102	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_51to200	homalt	98.7147	100.0000	97.4619	47.3262	192	0	192	5	4	80.0000
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	homalt	100.0000	100.0000	100.0000	36.3636	21	0	21	0	0
ckim-vqsr	INDEL	D6_15	map_l125_m0_e0	hetalt	100.0000	100.0000	100.0000	90.9091	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	map_l125_m0_e0	homalt	100.0000	100.0000	100.0000	93.1429	12	0	12	0	0
ckim-vqsr	INDEL	D6_15	map_l150_m0_e0	*	96.9697	100.0000	94.1176	95.6242	32	0	32	2	0	0.0000
ckim-vqsr	INDEL	D6_15	map_l150_m0_e0	het	95.2381	100.0000	90.9091	96.1938	20	0	20	2	0	0.0000
ckim-vqsr	INDEL	D6_15	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	91.2281	5	0	5	0	0

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