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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 909 910 911 912 913 914 915 916 917 ... 1720 1721 » 45601-45650 / 86044 show all
ckim-dragen	INDEL	D6_15	map_l125_m2_e1	het	96.5035	97.1831	95.8333	92.9550	69	2	69	3	0	0.0000
ckim-dragen	INDEL	D6_15	map_l125_m2_e1	homalt	95.8904	94.5946	97.2222	91.1548	35	2	35	1	1	100.0000
ckim-dragen	INDEL	D6_15	map_l150_m1_e0	homalt	96.0000	92.3077	100.0000	91.8919	24	2	24	0	0
ckim-dragen	INDEL	D6_15	map_l150_m2_e0	homalt	96.2963	92.8571	100.0000	92.1687	26	2	26	0	0
ckim-dragen	INDEL	D6_15	map_l150_m2_e1	hetalt	87.5000	77.7778	100.0000	90.9091	7	2	7	0	0
ckim-dragen	INDEL	D6_15	map_l150_m2_e1	homalt	96.4286	93.1034	100.0000	92.0354	27	2	27	0	0
ckim-dragen	INDEL	D6_15	map_l250_m1_e0	*	91.4286	88.8889	94.1176	97.0690	16	2	16	1	0	0.0000
ckim-dragen	INDEL	D6_15	map_l250_m2_e0	*	93.0233	90.9091	95.2381	96.9208	20	2	20	1	0	0.0000
ckim-dragen	INDEL	D6_15	map_l250_m2_e1	*	93.0233	90.9091	95.2381	97.0213	20	2	20	1	0	0.0000
ckim-dragen	INDEL	D6_15	segdup	het	96.7742	97.8261	95.7447	96.0338	90	2	90	4	0	0.0000
ckim-dragen	INDEL	I16_PLUS	HG002compoundhet	het	95.7890	95.7447	95.8333	94.6309	45	2	23	1	1	100.0000
ckim-dragen	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	96.6667	99.0244	94.4186	90.8276	203	2	203	12	11	91.6667
ckim-dragen	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	96.1538	92.5926	100.0000	92.3077	25	2	20	0	0
ckim-dragen	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	96.6667	99.0244	94.4186	90.8276	203	2	203	12	11	91.6667
ckim-dragen	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	*	66.6667	50.0000	100.0000	94.1176	2	2	2	0	0
ckim-dragen	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*	95.8314	95.7447	95.9184	80.7087	45	2	47	2	0	0.0000
ckim-dragen	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	het	99.4012	98.8095	100.0000	80.3121	166	2	164	0	0
ckim-dragen	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	99.4253	98.8571	100.0000	67.2285	173	2	175	0	0
ckim-dragen	INDEL	I16_PLUS	map_l100_m1_e0	*	90.5660	92.3077	88.8889	93.8215	24	2	24	3	0	0.0000
ckim-dragen	INDEL	I16_PLUS	map_l100_m2_e0	*	88.8889	92.3077	85.7143	94.7269	24	2	24	4	0	0.0000
ckim-dragen	INDEL	I16_PLUS	map_l100_m2_e1	*	88.8889	92.3077	85.7143	94.7955	24	2	24	4	0	0.0000
ckim-dragen	INDEL	I16_PLUS	map_siren	*	96.0323	97.6744	94.4444	91.6589	84	2	85	5	0	0.0000
ckim-dragen	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.2414	99.9435	98.5491	72.6182	3535	2	3532	52	52	100.0000
ckim-dragen	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.7904	99.7906	99.7901	80.0042	953	2	951	2	1	50.0000
ckim-dragen	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	97.5150	99.6497	95.4698	67.0354	569	2	569	27	27	100.0000
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.7868	99.5745	100.0000	69.2913	468	2	468	0	0
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	*	95.8333	92.0000	100.0000	65.1515	23	2	23	0	0
ckim-dragen	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	95.4545	91.3043	100.0000	12.5000	21	2	21	0	0
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	97.3094	99.6937	95.0365	73.7548	651	2	651	34	34	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.1501	98.8701	99.4318	73.9645	175	2	175	1	0	0.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.3797	99.1736	99.5868	69.7500	240	2	241	1	1	100.0000
ckim-dragen	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	98.0392	96.1538	100.0000	59.8425	50	2	51	0	0
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	het	98.3607	96.7742	100.0000	86.8534	60	2	61	0	0
ckim-dragen	INDEL	I6_15	lowcmp_SimpleRepeat_triTR_11to50	*	99.7602	99.5215	100.0000	47.5348	416	2	415	0	0
ckim-dragen	INDEL	I6_15	map_l100_m0_e0	*	95.3846	93.9394	96.8750	91.6449	31	2	31	1	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m1_e0	het	96.6102	96.6102	96.6102	89.1144	57	2	57	2	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m1_e0	hetalt	95.2381	90.9091	100.0000	81.1321	20	2	20	0	0
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	het	96.7213	96.7213	96.7213	89.9007	59	2	59	2	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e0	hetalt	95.2381	90.9091	100.0000	82.6087	20	2	20	0	0
ckim-dragen	INDEL	I6_15	map_l100_m2_e1	het	96.7213	96.7213	96.7213	90.1135	59	2	59	2	0	0.0000
ckim-dragen	INDEL	I6_15	map_l100_m2_e1	hetalt	95.2381	90.9091	100.0000	83.1933	20	2	20	0	0
ckim-dragen	INDEL	I6_15	map_l125_m1_e0	het	93.3333	93.3333	93.3333	92.0000	28	2	28	2	0	0.0000
ckim-dragen	INDEL	I6_15	map_l125_m2_e0	het	93.3333	93.3333	93.3333	93.0070	28	2	28	2	0	0.0000
ckim-dragen	INDEL	I6_15	map_l125_m2_e1	het	93.3333	93.3333	93.3333	93.1663	28	2	28	2	0	0.0000
ckim-dragen	INDEL	I6_15	segdup	*	97.1910	98.8571	95.5801	93.3013	173	2	173	8	0	0.0000
ckim-dragen	SNP	*	*	hetalt	99.3162	99.7704	98.8662	49.3103	869	2	872	10	9	90.0000
ckim-dragen	SNP	*	HG002compoundhet	hetalt	99.8839	99.7680	100.0000	22.0308	860	2	860	0	0
ckim-dragen	SNP	*	func_cds	homalt	99.9857	99.9713	100.0000	21.8438	6977	2	6977	0	0
ckim-dragen	SNP	*	lowcmp_SimpleRepeat_quadTR_51to200	homalt	97.5000	95.1220	100.0000	91.0112	39	2	48	0	0
ckim-dragen	SNP	ti	func_cds	homalt	99.9810	99.9621	100.0000	20.1424	5273	2	5273	0	0

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