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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 894 895 896 897 898 899 900 901 902 ... 1720 1721 » 44851-44900 / 86044 show all
egarrison-hhga	INDEL	*	lowcmp_SimpleRepeat_homopolymer_gt10	homalt	80.8511	90.4762	73.0769	99.9443	19	2	19	7	6	85.7143
ckim-isaac	INDEL	C6_15	*	*	0.0000	71.4286	0.0000	0.0000	5	2	0	0	0
ckim-isaac	INDEL	C6_15	*	het	0.0000	71.4286	0.0000	0.0000	5	2	0	0	0
ckim-isaac	INDEL	C6_15	HG002complexvar	*	0.0000	50.0000	0.0000	0.0000	2	2	0	0	0
ckim-isaac	INDEL	C6_15	HG002complexvar	het	0.0000	50.0000	0.0000	0.0000	2	2	0	0	0
ckim-isaac	INDEL	D16_PLUS	func_cds	*	90.9091	83.3333	100.0000	56.5217	10	2	10	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	66.6667	50.0000	100.0000	96.7742	2	2	2	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	66.6667	50.0000	100.0000	96.7213	2	2	2	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	90.9091	83.3333	100.0000	73.6842	10	2	15	0	0
ckim-isaac	INDEL	D16_PLUS	map_l100_m0_e0	hetalt	66.6667	50.0000	100.0000	92.5926	2	2	2	0	0
ckim-isaac	INDEL	D16_PLUS	map_l125_m0_e0	homalt		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	D16_PLUS	map_l125_m2_e1	hetalt	66.6667	50.0000	100.0000	93.1034	2	2	2	0	0
ckim-isaac	INDEL	D1_5	func_cds	*	99.3671	98.7421	100.0000	33.7553	157	2	157	0	0
ckim-isaac	INDEL	D1_5	func_cds	homalt	98.6301	97.2973	100.0000	17.2414	72	2	72	0	0
ckim-isaac	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	90.0000	81.8182	100.0000	99.2007	9	2	9	0	0
ckim-isaac	INDEL	D1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	85.7143	75.0000	100.0000	99.3392	6	2	6	0	0
ckim-isaac	INDEL	D1_5	tech_badpromoters	*	94.4444	89.4737	100.0000	32.0000	17	2	17	0	0
ckim-isaac	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	80.0000	66.6667	100.0000	95.9596	4	2	4	0	0
ckim-isaac	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	homalt	95.0000	90.4762	100.0000	24.0000	19	2	19	0	0
ckim-isaac	INDEL	D6_15	map_l125_m0_e0	hetalt	80.0000	66.6667	100.0000	90.4762	4	2	4	0	0
ckim-isaac	INDEL	D6_15	map_l150_m0_e0	hetalt	75.0000	60.0000	100.0000	91.6667	3	2	3	0	0
ckim-isaac	INDEL	D6_15	map_l150_m1_e0	hetalt	85.7143	75.0000	100.0000	89.8305	6	2	6	0	0
ckim-isaac	INDEL	D6_15	map_l150_m2_e0	hetalt	85.7143	75.0000	100.0000	91.3043	6	2	6	0	0
ckim-isaac	INDEL	I16_PLUS	HG002compoundhet	homalt	3.4483	33.3333	1.8182	61.5385	1	2	1	54	53	98.1481
ckim-isaac	INDEL	I16_PLUS	func_cds	het	87.5000	77.7778	100.0000	46.1538	7	2	7	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	het		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt		0.0000	0.0000	0.0000	0	2	0	0	0
ckim-isaac	INDEL	I16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	het		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	I16_PLUS	map_l100_m0_e0	homalt		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	I16_PLUS	map_l125_m0_e0	homalt		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	I16_PLUS	map_l150_m0_e0	het		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	I16_PLUS	map_l150_m1_e0	hetalt		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	I16_PLUS	map_l150_m2_e0	hetalt		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	I16_PLUS	map_l150_m2_e1	hetalt		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	I16_PLUS	segdup	homalt	94.4444	89.4737	100.0000	81.5217	17	2	17	0	0
ckim-isaac	INDEL	I16_PLUS	tech_badpromoters	homalt		0.0000		100.0000	0	2	0	0	0
ckim-isaac	INDEL	I1_5	map_l125_m1_e0	hetalt	90.9091	88.2353	93.7500	90.8571	15	2	15	1	1	100.0000
ckim-isaac	INDEL	I1_5	map_l150_m1_e0	hetalt	87.5000	77.7778	100.0000	94.8905	7	2	7	0	0
ckim-isaac	INDEL	I1_5	map_l150_m2_e0	hetalt	87.5000	77.7778	100.0000	95.4839	7	2	7	0	0
ckim-isaac	INDEL	I1_5	map_l150_m2_e1	hetalt	88.8889	80.0000	100.0000	95.0617	8	2	8	0	0
ckim-isaac	INDEL	I1_5	tech_badpromoters	*	95.2381	90.9091	100.0000	51.2195	20	2	20	0	0
ckim-isaac	INDEL	I1_5	tech_badpromoters	homalt	91.6667	84.6154	100.0000	54.1667	11	2	11	0	0
ckim-isaac	INDEL	I6_15	func_cds	hetalt	66.6667	50.0000	100.0000	33.3333	2	2	2	0	0
ckim-isaac	INDEL	I6_15	func_cds	homalt	92.8571	86.6667	100.0000	31.5789	13	2	13	0	0
ckim-vqsr	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	homalt	99.2908	99.7807	98.8056	70.5939	910	2	910	11	8	72.7273
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.6954	99.5943	99.7967	58.4810	491	2	491	1	0	0.0000
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	96.6165	99.2278	94.1392	60.2041	257	2	257	16	15	93.7500
ckim-vqsr	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.4848	99.7211	97.2789	61.7387	715	2	715	20	19	95.0000

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