PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
3751-3800 / 86044 show all
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
85.0000
20210
0.0000
ltrigg-rtg2INDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
96.1538
901000
ltrigg-rtg2INDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.3822
40500
ltrigg-rtg2INDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
95.4654
1701900
ltrigg-rtg2INDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.3510
30400
ltrigg-rtg2INDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
96.7320
901000
ltrigg-rtg2INDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
97.1591
901000
ltrigg-rtg2INDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
96.9274
1001100
ltrigg-rtg2INDELI1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
94.1860
901000
ltrigg-rtg2INDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.9011
20200
ltrigg-rtg2INDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
99.0868
20200
ltrigg-rtg2INDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
99.0991
20200
ltrigg-rtg2INDELI1_5segduphetalt
100.0000
100.0000
100.0000
96.8447
4805200
ltrigg-rtg2INDELI1_5segduphomalt
99.6825
100.0000
99.3671
91.5023
473047133
100.0000
ltrigg-rtg2INDELI1_5segdupwithalt*
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5segdupwithalthet
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5tech_badpromoters*
97.7778
100.0000
95.6522
52.0833
2202210
0.0000
ltrigg-rtg2INDELI1_5tech_badpromotershet
94.1176
100.0000
88.8889
43.7500
80810
0.0000
ltrigg-rtg2INDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
ltrigg-rtg2INDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
56.6667
1301300
ltrigg-rtg2INDELI6_15decoy*
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15decoyhet
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15decoyhetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15decoyhomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15func_cdshet
100.0000
100.0000
100.0000
34.2857
2402300
ltrigg-rtg2INDELI6_15func_cdshomalt
100.0000
100.0000
100.0000
28.5714
1501500
ltrigg-rtg2INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
62.1053
3603600
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
60.3376
9209400
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
61.2360
6806900
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8529
20200
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.6721
20200
ltrigg-rtg2INDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000