PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 697 698 699 700 701 702 703 704 705 ... 1720 1721 » 35001-35050 / 86044 show all
gduggal-snapvard	INDEL	D16_PLUS	map_l150_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l150_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l150_m2_e0	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l150_m2_e1	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m0_e0	*	66.6667	100.0000	50.0000	88.2353	1	0	1	1	0	0.0000
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m0_e0	het	66.6667	100.0000	50.0000	85.7143	1	0	1	1	0	0.0000
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m0_e0	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	map_l250_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D16_PLUS	tech_badpromoters	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D1_5	decoy	het	85.7143	100.0000	75.0000	99.9649	2	0	3	1	0	0.0000
gduggal-snapvard	INDEL	D1_5	decoy	homalt	100.0000	100.0000	100.0000	99.9097	1	0	1	0	0
gduggal-snapvard	INDEL	D1_5	func_cds	het	87.2852	100.0000	77.4390	47.4359	85	0	127	37	33	89.1892
gduggal-snapvard	INDEL	D1_5	func_cds	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapvard	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	66.6667	100.0000	50.0000	99.8173	7	0	2	2	2	100.0000
gduggal-snapfb	INDEL	C16_PLUS	map_l150_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m0_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m0_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m0_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m0_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m2_e1	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m2_e1	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_l250_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_siren	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_siren	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_siren	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	map_siren	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdup	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdup	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdup	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdupwithalt	*		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdupwithalt	het		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	segdupwithalt	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
gduggal-snapfb	INDEL	C16_PLUS	tech_badpromoters	*		0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge