PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
27251-27300 / 86044 show all
jlack-gatkINDEL*tech_badpromotershet
97.5000
100.0000
95.1220
50.6024
3903920
0.0000
jlack-gatkINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
jlack-gatkINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
56.5789
3303300
jlack-gatkINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000