PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
24901-24950 / 86044 show all
hfeng-pmm3INDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
hfeng-pmm3INDEL*lowcmp_SimpleRepeat_triTR_51to200homalt
97.9167
100.0000
95.9184
49.4845
4704722
100.0000
hfeng-pmm3INDEL*map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
95.0893
1101100
hfeng-pmm3INDEL*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
94.6429
90900
hfeng-pmm3INDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
hfeng-pmm3INDEL*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.9388
60600
hfeng-pmm3INDEL*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.5610
60600
hfeng-pmm3INDEL*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.6096
60600
hfeng-pmm3INDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9970
10100
hfeng-pmm3INDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9951
10100
hfeng-pmm3INDEL*segdupwithalthetalt
0.0000
100.0000
00000
hfeng-pmm3INDEL*segdupwithalthomalt
0.0000
100.0000
00000
hfeng-pmm3INDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
hfeng-pmm3INDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
3303300
hfeng-pmm3INDELC16_PLUS**
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
00000