PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
24751-24800 / 86044 show all
hfeng-pmm2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.4444
10100
hfeng-pmm2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.7500
10100
hfeng-pmm2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.0000
20200
hfeng-pmm2SNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
92.2581
1201200
hfeng-pmm2SNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
95.2381
10100
hfeng-pmm2SNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
96.9388
60600
hfeng-pmm2SNPtilowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
80.0000
20200
hfeng-pmm2SNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
87.5000
10100
hfeng-pmm2SNPtilowcmp_SimpleRepeat_quadTR_11to50homalt
100.0000
100.0000
100.0000
37.3409
39870398700
hfeng-pmm2SNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_triTR_11to50homalt
99.9300
100.0000
99.8600
30.7319
14270142721
50.0000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2SNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
97.4026
20200
hfeng-pmm2SNPtimap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
74.5455
1401400
hfeng-pmm2SNPtimap_l100_m1_e0hetalt
100.0000
100.0000
100.0000
73.8739
2902900
hfeng-pmm2SNPtimap_l100_m2_e0hetalt
100.0000
100.0000
100.0000
75.8065
3003000
hfeng-pmm2SNPtimap_l100_m2_e1hetalt
100.0000
100.0000
100.0000
75.2000
3103100
hfeng-pmm2SNPtimap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
80.0000
80800
hfeng-pmm2SNPtimap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
71.4286
2402400
hfeng-pmm2SNPtimap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
76.0000
2402400
hfeng-pmm2SNPtimap_l125_m2_e1hetalt
100.0000
100.0000
100.0000
76.0000
2402400
hfeng-pmm2SNPtimap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
90.3226
30300
hfeng-pmm2SNPtimap_l150_m1_e0hetalt
100.0000
100.0000
100.0000
76.5625
1501500
hfeng-pmm2SNPtimap_l150_m2_e0hetalt
100.0000
100.0000
100.0000
79.7297
1501500
hfeng-pmm2SNPtimap_l150_m2_e1hetalt
100.0000
100.0000
100.0000
79.7297
1501500
hfeng-pmm2SNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
hfeng-pmm2SNPtimap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
88.8889
40400
hfeng-pmm2SNPtimap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
87.5000
50500
hfeng-pmm2SNPtimap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
87.5000
50500
hfeng-pmm2SNPtisegduphetalt
100.0000
100.0000
100.0000
98.9011
20200
hfeng-pmm2SNPtisegdupwithalt*
0.0000
100.0000
00000
hfeng-pmm2SNPtisegdupwithalthet
0.0000
100.0000
00000
hfeng-pmm2SNPtisegdupwithalthetalt
0.0000
100.0000
00000
hfeng-pmm2SNPtisegdupwithalthomalt
0.0000
100.0000
00000
hfeng-pmm2SNPtitech_badpromotershetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2SNPtitech_badpromotershomalt
98.7952
100.0000
97.6190
43.2432
4104111
100.0000
hfeng-pmm2SNPtvdecoy*
0.0000
100.0000
00000