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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 428 429 430 431 432 433 434 435 436 ... 1720 1721 » 21551-21600 / 86044 show all
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.9992	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.9919	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	100.0000	100.0000	100.0000	41.6411	1330	0	1330	0	0
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	het	96.2963	100.0000	92.8571	87.5000	13	0	13	1	0	0.0000
ckim-vqsr	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt	96.2963	100.0000	92.8571	60.0000	13	0	13	1	1	100.0000
ckim-vqsr	INDEL	D1_5	map_l150_m0_e0	homalt	99.4152	100.0000	98.8372	90.7626	85	0	85	1	1	100.0000
ckim-vqsr	INDEL	D1_5	map_l250_m0_e0	*	88.4615	100.0000	79.3103	98.1481	46	0	46	12	0	0.0000
ckim-vqsr	INDEL	D1_5	map_l250_m0_e0	het	84.6154	100.0000	73.3333	98.2353	33	0	33	12	0	0.0000
ckim-vqsr	INDEL	D1_5	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	97.5000	13	0	13	0	0
ckim-vqsr	INDEL	D1_5	segdup	homalt	99.7222	100.0000	99.4460	94.5493	359	0	359	2	2	100.0000
ckim-vqsr	INDEL	D1_5	segdupwithalt	*	100.0000	100.0000	100.0000	99.9960	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	segdupwithalt	het	100.0000	100.0000	100.0000	99.9946	1	0	1	0	0
ckim-vqsr	INDEL	D1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
ckim-vqsr	INDEL	D1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	43.7500	9	0	9	0	0
ckim-vqsr	INDEL	D6_15	HG002compoundhet	homalt	27.2727	100.0000	15.7895	71.2121	24	0	24	128	127	99.2188
ckim-vqsr	INDEL	D6_15	decoy	*	100.0000	100.0000	100.0000	99.9554	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	decoy	het		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	decoy	hetalt	100.0000	100.0000	100.0000	99.2647	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	func_cds	*	100.0000	100.0000	100.0000	56.5657	43	0	43	0	0
ckim-vqsr	INDEL	D6_15	func_cds	het	100.0000	100.0000	100.0000	53.9683	29	0	29	0	0
ckim-vqsr	INDEL	D6_15	func_cds	hetalt	100.0000	100.0000	100.0000	60.0000	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	func_cds	homalt	100.0000	100.0000	100.0000	61.2903	12	0	12	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	97.1831	6	0	6	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	97.8873	3	0	3	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	98.0769	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	77.7778	43	0	43	1	1	100.0000
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	97.8723	4	0	4	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	98.4252	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	84.6154	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.8665	100.0000	99.7333	59.5032	374	0	374	1	0	0.0000
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8974	100.0000	99.7951	68.0419	487	0	487	1	1	100.0000
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8544	100.0000	99.7093	57.2671	343	0	343	1	0	0.0000
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	92.0000	2	0	2	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	93.3333	1	0	1	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ckim-vqsr	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt	100.0000	100.0000	100.0000	75.0000	1	0	1	0	0

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