PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
1801-1850 / 86044 show all
rpoplin-dv42INDELC6_15map_l250_m2_e0hetalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_l250_m2_e0homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15map_l250_m2_e1*
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_l250_m2_e1het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15map_l250_m2_e1hetalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_l250_m2_e1homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15map_siren*
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_sirenhet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15map_sirenhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15map_sirenhomalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15segdup*
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15segduphet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15segduphetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15segduphomalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15segdupwithalt*
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15segdupwithalthet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15segdupwithalthomalt
0.0000
100.0000
00000
rpoplin-dv42INDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSHG002compoundhethomalt
88.8889
100.0000
80.0000
68.7500
80822
100.0000
rpoplin-dv42INDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
98.0952
20200
rpoplin-dv42INDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
50.0000
40400
rpoplin-dv42INDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
97.9381
10111
100.0000
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
66.6667
100.0000
50.0000
97.8495
10111
100.0000
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.7636
100.0000
99.5283
45.6410
211021110
0.0000
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
99.4286
100.0000
98.8636
79.0974
8708710
0.0000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10het
99.0099
100.0000
98.0392
81.6547
5205010
0.0000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
46.1538
1201400
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
80.3419
2302300
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
96.2963
100.0000
92.8571
33.3333
1301311
100.0000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD16_PLUSmap_l125_m0_e0*
100.0000
100.0000
100.0000
93.7824
1201200
rpoplin-dv42INDELD16_PLUSmap_l125_m0_e0het
100.0000
100.0000
100.0000
92.8000
90900
rpoplin-dv42INDELD16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
92.8571
10100