PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
17851-17900 / 86044 show all | |||||||||||||||
| gduggal-bwavard | INDEL | C1_5 | map_l150_m0_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.0617 | 0 | 0 | 4 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l150_m1_e0 | * | 0.0000 | 0.0000 | 44.1860 | 96.2511 | 0 | 0 | 19 | 24 | 3 | 12.5000 | |
| gduggal-bwavard | INDEL | C1_5 | map_l150_m1_e0 | het | 0.0000 | 0.0000 | 35.1351 | 96.3330 | 0 | 0 | 13 | 24 | 3 | 12.5000 | |
| gduggal-bwavard | INDEL | C1_5 | map_l150_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | map_l150_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.6522 | 0 | 0 | 6 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l150_m2_e0 | * | 0.0000 | 0.0000 | 41.3043 | 96.3434 | 0 | 0 | 19 | 27 | 3 | 11.1111 | |
| gduggal-bwavard | INDEL | C1_5 | map_l150_m2_e0 | het | 0.0000 | 0.0000 | 32.5000 | 96.4093 | 0 | 0 | 13 | 27 | 3 | 11.1111 | |
| gduggal-bwavard | INDEL | C1_5 | map_l150_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | map_l150_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.8333 | 0 | 0 | 6 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l150_m2_e1 | * | 0.0000 | 0.0000 | 42.5532 | 96.3509 | 0 | 0 | 20 | 27 | 3 | 11.1111 | |
| gduggal-bwavard | INDEL | C1_5 | map_l150_m2_e1 | het | 0.0000 | 0.0000 | 34.1463 | 96.4004 | 0 | 0 | 14 | 27 | 3 | 11.1111 | |
| gduggal-bwavard | INDEL | C1_5 | map_l150_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | map_l150_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 95.9732 | 0 | 0 | 6 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m0_e0 | * | 0.0000 | 0.0000 | 99.1477 | 0 | 0 | 0 | 3 | 0 | 0.0000 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m0_e0 | het | 0.0000 | 0.0000 | 99.0260 | 0 | 0 | 0 | 3 | 0 | 0.0000 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m0_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m1_e0 | * | 0.0000 | 0.0000 | 30.7692 | 98.0798 | 0 | 0 | 4 | 9 | 1 | 11.1111 | |
| gduggal-bwavard | INDEL | C1_5 | map_l250_m1_e0 | het | 0.0000 | 0.0000 | 18.1818 | 98.1450 | 0 | 0 | 2 | 9 | 1 | 11.1111 | |
| gduggal-bwavard | INDEL | C1_5 | map_l250_m1_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m1_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 97.6190 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m2_e0 | * | 0.0000 | 0.0000 | 30.7692 | 98.2736 | 0 | 0 | 4 | 9 | 1 | 11.1111 | |
| gduggal-bwavard | INDEL | C1_5 | map_l250_m2_e0 | het | 0.0000 | 0.0000 | 18.1818 | 98.3409 | 0 | 0 | 2 | 9 | 1 | 11.1111 | |
| gduggal-bwavard | INDEL | C1_5 | map_l250_m2_e0 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m2_e0 | homalt | 0.0000 | 0.0000 | 100.0000 | 97.7778 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m2_e1 | * | 0.0000 | 0.0000 | 30.7692 | 98.3269 | 0 | 0 | 4 | 9 | 1 | 11.1111 | |
| gduggal-bwavard | INDEL | C1_5 | map_l250_m2_e1 | het | 0.0000 | 0.0000 | 18.1818 | 98.3942 | 0 | 0 | 2 | 9 | 1 | 11.1111 | |
| gduggal-bwavard | INDEL | C1_5 | map_l250_m2_e1 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | map_l250_m2_e1 | homalt | 0.0000 | 0.0000 | 100.0000 | 97.8261 | 0 | 0 | 2 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | map_siren | * | 0.0000 | 0.0000 | 57.1429 | 94.8112 | 0 | 0 | 84 | 63 | 9 | 14.2857 | |
| gduggal-bwavard | INDEL | C1_5 | map_siren | het | 0.0000 | 0.0000 | 46.6102 | 95.3025 | 0 | 0 | 55 | 63 | 9 | 14.2857 | |
| gduggal-bwavard | INDEL | C1_5 | map_siren | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | map_siren | homalt | 0.0000 | 0.0000 | 100.0000 | 90.9657 | 0 | 0 | 29 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | segdup | * | 0.0000 | 0.0000 | 68.0000 | 99.2789 | 0 | 0 | 17 | 8 | 3 | 37.5000 | |
| gduggal-bwavard | INDEL | C1_5 | segdup | het | 0.0000 | 0.0000 | 61.9048 | 99.3151 | 0 | 0 | 13 | 8 | 3 | 37.5000 | |
| gduggal-bwavard | INDEL | C1_5 | segdup | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | segdup | homalt | 0.0000 | 0.0000 | 100.0000 | 99.0025 | 0 | 0 | 4 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwavard | INDEL | C1_5 | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwavard | INDEL | C1_5 | segdupwithalt | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwavard | INDEL | C1_5 | tech_badpromoters | * | 0.0000 | 0.0000 | 100.0000 | 83.3333 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C1_5 | tech_badpromoters | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwavard | INDEL | C1_5 | tech_badpromoters | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C1_5 | tech_badpromoters | homalt | 0.0000 | 0.0000 | 100.0000 | 66.6667 | 0 | 0 | 1 | 0 | 0 | ||
| gduggal-bwavard | INDEL | C6_15 | * | * | 79.7527 | 100.0000 | 66.3239 | 94.4109 | 7 | 0 | 258 | 131 | 32 | 24.4275 | |
| gduggal-bwavard | INDEL | C6_15 | * | het | 73.0769 | 100.0000 | 57.5758 | 94.9772 | 7 | 0 | 171 | 126 | 30 | 23.8095 | |
| gduggal-bwavard | INDEL | C6_15 | * | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| gduggal-bwavard | INDEL | C6_15 | * | homalt | 0.0000 | 0.0000 | 94.5652 | 91.2130 | 0 | 0 | 87 | 5 | 2 | 40.0000 | |
| gduggal-bwavard | INDEL | C6_15 | HG002complexvar | * | 87.4786 | 100.0000 | 77.7439 | 86.1311 | 4 | 0 | 255 | 73 | 32 | 43.8356 | |