PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
17451-17500 / 86044 show all
gduggal-bwafbSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
92.3077
100.0000
85.7143
88.3333
60611
100.0000
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
92.7273
1201200
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
10100
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.7500
10100
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.8571
10100
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.1538
20200
gduggal-bwafbSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
92.7273
1201200
gduggal-bwafbSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
95.8333
10100
gduggal-bwafbSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_diTR_51to200homalt
100.0000
100.0000
100.0000
96.7914
60600
gduggal-bwafbSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
84.6154
20200
gduggal-bwafbSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
66.6667
100.0000
50.0000
75.0000
10111
100.0000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
75.0000
10100
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
97.4074
80700
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
97.8541
60500
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
94.5946
20200
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwafbSNPtilowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000