PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
15501-15550 / 86044 show all
gduggal-bwavardSNP*decoy*
0.0000
0.0000
100.0000
99.9992
00200
gduggal-bwavardSNP*decoyhet
0.0000
100.0000
00000
gduggal-bwavardSNP*decoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*decoyhomalt
0.0000
0.0000
100.0000
99.9933
00200
gduggal-bwavardSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_triTR_51to200*
80.0000
100.0000
66.6667
97.4860
90630
0.0000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_triTR_51to200het
83.3333
100.0000
71.4286
97.7636
70520
0.0000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
66.6667
100.0000
50.0000
95.5556
20110
0.0000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*segdupwithalt*
0.0000
100.0000
00000
gduggal-bwavardSNP*segdupwithalthet
0.0000
100.0000
00000
gduggal-bwavardSNP*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNP*segdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwavardSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtidecoy*
0.0000
0.0000
100.0000
99.9987
00200
gduggal-bwavardSNPtidecoyhet
0.0000
100.0000
00000
gduggal-bwavardSNPtidecoyhetalt
0.0000
0.0000
0.0000
00000