PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
14551-14600 / 86044 show all
anovak-vgINDELI6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15segdupwithalt*
0.0000
100.0000
00000
anovak-vgINDELI6_15segdupwithalthet
0.0000
100.0000
00000
anovak-vgINDELI6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELI6_15segdupwithalthomalt
0.0000
100.0000
00000
anovak-vgINDELI6_15tech_badpromotershomalt
75.0000
100.0000
60.0000
54.5455
30322
100.0000
anovak-vgSNP*decoy*
0.0000
0.0000
50.0000
99.9991
00111
100.0000
anovak-vgSNP*decoyhet
0.0000
0.0000
99.9995
00011
100.0000
anovak-vgSNP*decoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*decoyhomalt
0.0000
0.0000
100.0000
99.9974
00100
anovak-vgSNP*lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
20000
anovak-vgSNP*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
20000
anovak-vgSNP*lowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
10000
anovak-vgSNP*lowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*segdupwithalt*
0.0000
100.0000
00000
anovak-vgSNP*segdupwithalthet
0.0000
100.0000
00000
anovak-vgSNP*segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNP*segdupwithalthomalt
0.0000
100.0000
00000
anovak-vgSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
anovak-vgSNPtidecoy*
0.0000
0.0000
50.0000
99.9986
00111
100.0000