PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
14401-14450 / 86044 show all
bgallagher-sentieonINDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6094
10100
bgallagher-sentieonINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9380
10100
bgallagher-sentieonINDELD1_5func_cds*
100.0000
100.0000
100.0000
40.7407
159016000
bgallagher-sentieonINDELD1_5func_cdshet
100.0000
100.0000
100.0000
46.5839
8508600
bgallagher-sentieonINDELD1_5func_cdshetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
31.4815
7407400
bgallagher-sentieonINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.8695
1101100
bgallagher-sentieonINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7118
80800
bgallagher-sentieonINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.2973
10100
bgallagher-sentieonINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3651
20200
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.9130
1001000
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.7993
70700
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.8750
10100
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3443
20200
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.6218
100.0000
99.2465
77.6468
922092273
42.8571
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.9240
100.0000
99.8480
80.1148
657065710
0.0000
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
81.9472
369036900
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.1481
10100
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.3684
10100
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9992
10100
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9912
10100
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
41.8452
13300133000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
92.8571
100.0000
86.6667
86.6071
1301321
50.0000
bgallagher-sentieonINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
58.3333
1301322
100.0000
bgallagher-sentieonINDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.4576
30300
bgallagher-sentieonINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.7011
20200
bgallagher-sentieonINDELD1_5map_l150_m0_e0homalt
99.4152
100.0000
98.8372
90.2935
8508511
100.0000
bgallagher-sentieonINDELD1_5map_l250_m0_e0*
93.8776
100.0000
88.4615
97.3537
4604660
0.0000
bgallagher-sentieonINDELD1_5map_l250_m0_e0het
91.6667
100.0000
84.6154
97.2898
3303360
0.0000
bgallagher-sentieonINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.3085
1301300
bgallagher-sentieonINDELD1_5map_l250_m1_e0het
96.5217
100.0000
93.2773
95.6962
111011181
12.5000
bgallagher-sentieonINDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.1429
30300
bgallagher-sentieonINDELD1_5map_l250_m2_e0het
96.8000
100.0000
93.7984
95.8694
121012181
12.5000
bgallagher-sentieonINDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.6744
30300
bgallagher-sentieonINDELD1_5map_l250_m2_e1het
96.8254
100.0000
93.8462
95.9286
122012281
12.5000
bgallagher-sentieonINDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.7444
30300
bgallagher-sentieonINDELD1_5segduphomalt
99.7222
100.0000
99.4460
94.4986
359035922
100.0000
bgallagher-sentieonINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9942
10100
bgallagher-sentieonINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9912
10100
bgallagher-sentieonINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000