PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
13701-13750 / 86044 show all
bgallagher-sentieonINDEL*decoyhet
100.0000
100.0000
100.0000
99.9414
60600
bgallagher-sentieonINDEL*decoyhetalt
100.0000
100.0000
100.0000
99.8252
10100
bgallagher-sentieonINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9295
30300
bgallagher-sentieonINDEL*func_cdshet
99.5392
100.0000
99.0826
49.7696
214021620
0.0000
bgallagher-sentieonINDEL*func_cdshomalt
99.7792
100.0000
99.5595
38.4824
226022611
100.0000
bgallagher-sentieonINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
97.5610
100.0000
95.2381
99.3365
2002010
0.0000
bgallagher-sentieonINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4118
1201200
bgallagher-sentieonINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.7391
30300
bgallagher-sentieonINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
90.9091
100.0000
83.3333
99.4192
50510
0.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
97.1429
100.0000
94.4444
99.4067
1701710
0.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4856
1001000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.3415
30300
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
88.8889
100.0000
80.0000
99.5040
40410
0.0000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.7788
100.0000
99.5585
74.0995
13530135364
66.6667
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.7273
30300
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.9167
20200
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
96.1538
10100
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.8731
1601600
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.9633
2102100
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_triTR_11to50homalt
99.8608
100.0000
99.7220
47.5832
21520215266
100.0000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_triTR_51to200homalt
96.9072
100.0000
94.0000
54.1284
4704733
100.0000
bgallagher-sentieonINDEL*map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
94.9541
1101100
bgallagher-sentieonINDEL*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
94.4785
90900
bgallagher-sentieonINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.7033
60600
bgallagher-sentieonINDEL*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.3094
60600
bgallagher-sentieonINDEL*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.3684
60600
bgallagher-sentieonINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9974
10100
bgallagher-sentieonINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9960
10100
bgallagher-sentieonINDEL*segdupwithalthetalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*segdupwithalthomalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
bgallagher-sentieonINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
3303300
bgallagher-sentieonINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000