PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
13501-13550 / 86044 show all
astatham-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8636
10100
astatham-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.6667
10100
astatham-gatkINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8584
10100
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.5517
10100
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.7912
100.0000
99.5833
75.9398
478047822
100.0000
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8557
100.0000
99.7118
79.1717
346034611
100.0000
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
99.5587
100.0000
99.1213
72.7881
564056455
100.0000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8968
100.0000
99.7938
64.2066
968096822
100.0000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9933
10100
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9843
10100
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
66.6667
100.0000
50.0000
98.3471
10111
100.0000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.6269
100.0000
99.2565
66.2907
267026722
100.0000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_51to200het
80.0000
100.0000
66.6667
91.6667
20210
0.0000
astatham-gatkINDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
astatham-gatkINDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
93.9597
90900
astatham-gatkINDELI1_5map_l100_m0_e0homalt
99.0476
100.0000
98.1132
80.6038
208020843
75.0000
astatham-gatkINDELI1_5map_l100_m1_e0homalt
99.5197
100.0000
99.0440
80.6440
518051854
80.0000
astatham-gatkINDELI1_5map_l100_m2_e0homalt
99.5314
100.0000
99.0672
81.9892
531053154
80.0000
astatham-gatkINDELI1_5map_l100_m2_e1homalt
99.5392
100.0000
99.0826
82.0606
540054054
80.0000
astatham-gatkINDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
96.2963
40400
astatham-gatkINDELI1_5map_l125_m0_e0homalt
98.7013
100.0000
97.4359
85.4478
114011432
66.6667
astatham-gatkINDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
93.1452
1701700
astatham-gatkINDELI1_5map_l125_m1_e0homalt
99.5434
100.0000
99.0909
83.2146
327032732
66.6667
astatham-gatkINDELI1_5map_l125_m2_e0hetalt
100.0000
100.0000
100.0000
93.2862
1901900
astatham-gatkINDELI1_5map_l125_m2_e0homalt
99.5620
100.0000
99.1279
84.4625
341034132
66.6667
astatham-gatkINDELI1_5map_l125_m2_e1hetalt
100.0000
100.0000
100.0000
93.4028
1901900
astatham-gatkINDELI1_5map_l125_m2_e1homalt
99.5646
100.0000
99.1329
84.6970
343034332
66.6667
astatham-gatkINDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
96.1538
30300
astatham-gatkINDELI1_5map_l150_m0_e0homalt
98.5294
100.0000
97.1014
88.8530
6706722
100.0000
astatham-gatkINDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
95.2128
90900
astatham-gatkINDELI1_5map_l150_m1_e0homalt
99.2481
100.0000
98.5075
86.7676
198019832
66.6667
astatham-gatkINDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
95.8525
90900
astatham-gatkINDELI1_5map_l150_m2_e0homalt
99.2593
100.0000
98.5294
88.3095
201020132
66.6667
astatham-gatkINDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
95.5157
1001000
astatham-gatkINDELI1_5map_l150_m2_e1homalt
99.2701
100.0000
98.5507
88.3838
204020432
66.6667