PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
13401-13450 / 86044 show all
astatham-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
96.4427
100.0000
93.1298
87.4641
122012299
100.0000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.9624
1802000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
92.1311
2402400
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
76.2821
3503700
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
85.4772
3503500
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
100.0000
100.0000
100.0000
75.8152
8908900
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
75.4630
5305300
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
64.9123
2002000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
83.1579
1601600
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
50.0000
100.0000
33.3333
94.9153
10122
100.0000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
86.7925
100.0000
76.6667
88.7640
2302377
100.0000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
89.7959
100.0000
81.4815
87.6147
2202255
100.0000
astatham-gatkINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
94.5736
100.0000
89.7059
91.5106
6106177
100.0000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
93.1818
100.0000
87.2340
88.1910
4104166
100.0000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
88.8889
100.0000
80.0000
91.5254
40411
100.0000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
100.0000
100.0000
100.0000
84.3750
4504500
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
100.0000
100.0000
30000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
100.0000
100.0000
100.0000
78.8889
3703800
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
100.0000
100.0000
100.0000
82.2222
1601600
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
65.8537
1301400
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
83.6735
80800
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
100.0000
100.0000
100.0000
40.0000
20300
astatham-gatkINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
astatham-gatkINDELI16_PLUSmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
90.0000
10100
astatham-gatkINDELI16_PLUSmap_l100_m0_e0homalt
80.0000
100.0000
66.6667
98.2558
20210
0.0000
astatham-gatkINDELI16_PLUSmap_l100_m1_e0homalt
90.9091
100.0000
83.3333
97.6000
50510
0.0000
astatham-gatkINDELI16_PLUSmap_l100_m2_e0homalt
83.3333
100.0000
71.4286
97.5177
50520
0.0000
astatham-gatkINDELI16_PLUSmap_l100_m2_e1homalt
83.3333
100.0000
71.4286
97.5265
50520
0.0000