PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
1201-1250 / 86044 show all
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_quadTR_51to200homalt
85.7143
100.0000
75.0000
91.1111
60621
50.0000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
98.2456
10100
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
97.7778
10100
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
raldana-dualsentieonSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvmap_l100_m0_e0hetalt
96.9697
100.0000
94.1176
64.5833
1601611
100.0000
raldana-dualsentieonSNPtvmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
75.0000
90900
raldana-dualsentieonSNPtvmap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
88.8889
30300
raldana-dualsentieonSNPtvmap_l250_m0_e0hetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvmap_l250_m1_e0hetalt
100.0000
100.0000
100.0000
88.8889
40400
raldana-dualsentieonSNPtvmap_l250_m2_e0hetalt
100.0000
100.0000
100.0000
87.8049
50500
raldana-dualsentieonSNPtvmap_l250_m2_e1hetalt
100.0000
100.0000
100.0000
88.0952
50500
raldana-dualsentieonSNPtvsegduphetalt
100.0000
100.0000
100.0000
96.2766
70700
raldana-dualsentieonSNPtvsegdupwithalt*
0.0000
100.0000
00000
raldana-dualsentieonSNPtvsegdupwithalthet
0.0000
100.0000
00000
raldana-dualsentieonSNPtvsegdupwithalthetalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
raldana-dualsentieonSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDEL*decoyhetalt
100.0000
100.0000
100.0000
99.8494
10100
rpoplin-dv42INDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9304
30300
rpoplin-dv42INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
80.0000
100.0000
66.6667
96.7742
20211
100.0000
rpoplin-dv42INDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDEL*lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDEL*map_l125_m0_e0hetalt
91.6667
100.0000
84.6154
95.9627
1101120
0.0000
rpoplin-dv42INDEL*map_l150_m0_e0hetalt
94.7368
100.0000
90.0000
96.1390
90910
0.0000
rpoplin-dv42INDEL*map_l250_m0_e0hetalt
0.0000
0.0000
99.3464
00010
0.0000
rpoplin-dv42INDEL*map_l250_m1_e0hetalt
92.3077
100.0000
85.7143
97.7564
60610
0.0000
rpoplin-dv42INDEL*map_l250_m2_e0hetalt
92.3077
100.0000
85.7143
98.1333
60610
0.0000
rpoplin-dv42INDEL*map_l250_m2_e1hetalt
92.3077
100.0000
85.7143
98.1771
60610
0.0000
rpoplin-dv42INDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9996
10100
rpoplin-dv42INDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9953
10100
rpoplin-dv42INDEL*segdupwithalthetalt
0.0000
100.0000
00000
rpoplin-dv42INDEL*segdupwithalthomalt
0.0000
100.0000
00000
rpoplin-dv42INDEL*tech_badpromotershet
98.7342
100.0000
97.5000
49.3671
3903911
100.0000
rpoplin-dv42INDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
rpoplin-dv42INDELC16_PLUS**
0.0000
100.0000
00000
rpoplin-dv42INDELC16_PLUS*het
0.0000
100.0000
00000
rpoplin-dv42INDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000