PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
9601-9650 / 86044 show all
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.3077
20200
ltrigg-rtg1INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.8261
10100
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
71.6216
4304200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.4026
40400
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.7528
20200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.4762
20200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
81.8182
20200
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
75.0000
10100
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
50.0000
10100
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
78.4024
7407300
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.5547
60700
ltrigg-rtg1INDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
25.0000
2102100
ltrigg-rtg1INDELD6_15map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
91.5493
60600
ltrigg-rtg1INDELD6_15map_l125_m0_e0homalt
100.0000
100.0000
100.0000
90.1639
1201200
ltrigg-rtg1INDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
91.9355
50500
ltrigg-rtg1INDELD6_15map_l150_m0_e0homalt
100.0000
100.0000
100.0000
93.1373
70700
ltrigg-rtg1INDELD6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
91.8367
80800
ltrigg-rtg1INDELD6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
92.4528
80800
ltrigg-rtg1INDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.5517
20200
ltrigg-rtg1INDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.4912
20200
ltrigg-rtg1INDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
94.5055
50500
ltrigg-rtg1INDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.9231
20200
ltrigg-rtg1INDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
94.3396
60600
ltrigg-rtg1INDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.9697
20200
ltrigg-rtg1INDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
94.5455
60600
ltrigg-rtg1INDELD6_15segdupwithalt*
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15segdupwithalthet
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15segdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELD6_15tech_badpromoters*
100.0000
100.0000
100.0000
48.4848
1701700
ltrigg-rtg1INDELD6_15tech_badpromotershet
100.0000
100.0000
100.0000
41.1765
1001000
ltrigg-rtg1INDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
66.6667
10100
ltrigg-rtg1INDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
ltrigg-rtg1INDELI16_PLUSHG002compoundhethomalt
10.1695
100.0000
5.3571
68.1818
3035352
98.1132
ltrigg-rtg1INDELI16_PLUSdecoy*
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSdecoyhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSdecoyhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
66.6667
20200
ltrigg-rtg1INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000