PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
9301-9350 / 86044 show all
ltrigg-rtg1INDELC1_5map_sirenhet
0.0000
0.0000
90.9091
96.4111
002020
0.0000
ltrigg-rtg1INDELC1_5map_sirenhetalt
0.0000
0.0000
85.7143
97.1074
00611
100.0000
ltrigg-rtg1INDELC1_5map_sirenhomalt
0.0000
0.0000
100.0000
97.1429
001100
ltrigg-rtg1INDELC1_5segdup*
0.0000
0.0000
100.0000
99.4494
00800
ltrigg-rtg1INDELC1_5segduphet
0.0000
0.0000
100.0000
99.5658
00300
ltrigg-rtg1INDELC1_5segduphetalt
0.0000
0.0000
100.0000
99.6479
00100
ltrigg-rtg1INDELC1_5segduphomalt
0.0000
0.0000
100.0000
99.1632
00400
ltrigg-rtg1INDELC1_5segdupwithalt*
0.0000
100.0000
00000
ltrigg-rtg1INDELC1_5segdupwithalthet
0.0000
100.0000
00000
ltrigg-rtg1INDELC1_5segdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC1_5segdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC1_5tech_badpromoters*
0.0000
0.0000
50.0000
00010
0.0000
ltrigg-rtg1INDELC1_5tech_badpromotershet
0.0000
0.0000
0.0000
00010
0.0000
ltrigg-rtg1INDELC1_5tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELC1_5tech_badpromotershomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15**
98.9362
100.0000
97.8947
93.9625
7037283
37.5000
ltrigg-rtg1INDELC6_15*het
98.8701
100.0000
97.7654
93.0539
7017540
0.0000
ltrigg-rtg1INDELC6_15*hetalt
0.0000
0.0000
97.9452
93.5654
0014332
66.6667
ltrigg-rtg1INDELC6_15*homalt
0.0000
0.0000
98.1818
96.2017
005411
100.0000
ltrigg-rtg1INDELC6_15HG002complexvar*
99.3197
100.0000
98.6486
84.1134
4036552
40.0000
ltrigg-rtg1INDELC6_15HG002complexvarhet
99.4186
100.0000
98.8439
78.6420
4017120
0.0000
ltrigg-rtg1INDELC6_15HG002complexvarhetalt
0.0000
0.0000
98.6111
83.5616
0014221
50.0000
ltrigg-rtg1INDELC6_15HG002complexvarhomalt
0.0000
0.0000
98.1132
91.7574
005211
100.0000
ltrigg-rtg1INDELC6_15HG002compoundhet*
0.0000
0.0000
97.7778
86.8677
0013232
66.6667
ltrigg-rtg1INDELC6_15HG002compoundhethet
0.0000
0.0000
95.0000
88.0952
001910
0.0000
ltrigg-rtg1INDELC6_15HG002compoundhethetalt
0.0000
0.0000
99.1228
86.3309
0011311
100.0000
ltrigg-rtg1INDELC6_15HG002compoundhethomalt
0.0000
0.0000
96.1538
00011
100.0000
ltrigg-rtg1INDELC6_15decoy*
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15decoyhet
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15decoyhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15decoyhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15func_cds*
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15func_cdshet
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15func_cdshetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15func_cdshomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
80.0000
97.5689
001231
33.3333
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
80.0000
97.5248
00410
0.0000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
66.6667
98.0952
00421
50.0000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
96.0000
00400
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
93.3333
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
87.5000
00010
0.0000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_merged*
100.0000
100.0000
100.0000
95.3073
1016800
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
94.4147
107300
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
100.0000
94.9935
007700
ltrigg-rtg1INDELC6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
100.0000
97.5510
001800
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
95.9064
95.2710
0016472
28.5714
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
94.8718
94.2605
007440
0.0000
ltrigg-rtg1INDELC6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
95.8904
95.3115
007032
66.6667