PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
8501-8550 / 86044 show all
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9919
10100
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
41.6155
13300133000
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
87.7358
1301300
jmaeng-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
59.4595
1301322
100.0000
jmaeng-gatkINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.3415
1301300
jmaeng-gatkINDELD1_5segduphomalt
99.7222
100.0000
99.4460
94.5203
359035922
100.0000
jmaeng-gatkINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9960
10100
jmaeng-gatkINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9948
10100
jmaeng-gatkINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
jmaeng-gatkINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
jmaeng-gatkINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
jmaeng-gatkINDELD6_15HG002compoundhethomalt
26.0870
100.0000
15.0000
70.0375
24024136135
99.2647
jmaeng-gatkINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9558
10100
jmaeng-gatkINDELD6_15decoyhet
0.0000
100.0000
00000
jmaeng-gatkINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.2754
10100
jmaeng-gatkINDELD6_15decoyhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELD6_15func_cds*
100.0000
100.0000
100.0000
57.0000
4304300
jmaeng-gatkINDELD6_15func_cdshet
100.0000
100.0000
100.0000
56.0606
2902900
jmaeng-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
jmaeng-gatkINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
58.6207
1201200
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.1831
60600
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8102
30300
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
jmaeng-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.2456
10100
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.8506
100.0000
97.7273
77.0833
4304311
100.0000
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.8723
40400
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3740
20200
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
20200
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.7333
100.0000
99.4681
59.7861
374037421
50.0000
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8974
100.0000
99.7951
67.7888
487048711
100.0000
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.7093
100.0000
99.4203
57.5646
343034321
50.0000
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.0000
20200
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
92.8571
10100
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jmaeng-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
75.0000
10100
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.3590
100.0000
98.7261
85.0476
155015520
0.0000
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.0388
7407400
jmaeng-gatkINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.1758
90900