PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
8151-8200 / 86044 show all
jli-customINDELD6_15decoyhomalt
0.0000
100.0000
00000
jli-customINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
jli-customINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
61.2903
1201200
jli-customINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
96.1538
60600
jli-customINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
96.7742
30300
jli-customINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200
jli-customINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.6744
10100
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
76.5027
4304300
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.0803
40400
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.5904
20200
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
85.7143
20200
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.8665
100.0000
99.7333
58.1006
374037410
0.0000
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.8974
100.0000
99.7951
64.8415
487048711
100.0000
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8544
100.0000
99.7093
55.8974
343034310
0.0000
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
89.4737
20200
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
90.0000
10100
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jli-customINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
66.6667
10100
jli-customINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
81.0742
7407400
jli-customINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.2437
90900
jli-customINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.7287
60700
jli-customINDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
99.7748
100.0000
99.5506
33.1832
443044322
100.0000
jli-customINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
34.3750
2102100
jli-customINDELD6_15map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
90.0000
60600
jli-customINDELD6_15map_l125_m0_e0homalt
100.0000
100.0000
100.0000
91.6667
1201200
jli-customINDELD6_15map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
84.4262
1901900
jli-customINDELD6_15map_l125_m2_e0hetalt
100.0000
100.0000
100.0000
86.5248
1901900
jli-customINDELD6_15map_l150_m0_e0*
100.0000
100.0000
100.0000
93.3194
3203200
jli-customINDELD6_15map_l150_m0_e0het
100.0000
100.0000
100.0000
93.6102
2002000
jli-customINDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
90.0000
50500
jli-customINDELD6_15map_l150_m0_e0homalt
100.0000
100.0000
100.0000
93.9655
70700
jli-customINDELD6_15map_l150_m1_e0het
100.0000
100.0000
100.0000
92.4272
3903900
jli-customINDELD6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
91.1111
80800
jli-customINDELD6_15map_l150_m2_e0het
100.0000
100.0000
100.0000
92.0553
4604600
jli-customINDELD6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
92.3077
80800
jli-customINDELD6_15map_l150_m2_e1het
100.0000
100.0000
100.0000
92.1008
4704700
jli-customINDELD6_15map_l250_m0_e0*
100.0000
100.0000
100.0000
97.5207
60600
jli-customINDELD6_15map_l250_m0_e0het
100.0000
100.0000
100.0000
97.4684
40400
jli-customINDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
jli-customINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.6102
20200
jli-customINDELD6_15map_l250_m1_e0*
100.0000
100.0000
100.0000
95.9732
1801800
jli-customINDELD6_15map_l250_m1_e0het
100.0000
100.0000
100.0000
96.1938
1101100
jli-customINDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.1538
20200
jli-customINDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
95.2830
50500
jli-customINDELD6_15map_l250_m2_e0*
100.0000
100.0000
100.0000
95.7854
2202200
jli-customINDELD6_15map_l250_m2_e0het
100.0000
100.0000
100.0000
95.8209
1401400
jli-customINDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
96.8750
20200
jli-customINDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
95.1220
60600
jli-customINDELD6_15map_l250_m2_e1*
100.0000
100.0000
100.0000
95.9032
2202200