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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1354 1355 1356 1357 1358 1359 1360 1361 1362 ... 1720 1721 » 67851-67900 / 86044 show all
gduggal-snapvard	INDEL	I1_5	map_siren	hetalt	0.0000	36.6071	0.0000	0.0000	41	71	0	0	0
gduggal-snapvard	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	0.0000	16.4706	0.0000	0.0000	14	71	0	0	0
hfeng-pmm2	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	96.9762	95.3595	98.6486	84.3187	1459	71	1460	20	10	50.0000
hfeng-pmm2	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	96.9762	95.3595	98.6486	84.3187	1459	71	1460	20	10	50.0000
hfeng-pmm2	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.8210	86.6038	100.0000	48.3207	459	71	477	0	0
jli-custom	INDEL	*	map_l100_m2_e0	*	98.4246	98.0774	98.7742	83.9477	3622	71	3626	45	15	33.3333
hfeng-pmm1	SNP	*	HG002complexvar	homalt	99.9818	99.9754	99.9882	20.0017	288503	71	288488	34	32	94.1176
hfeng-pmm3	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	*	97.0406	95.3595	98.7821	83.5045	1459	71	1460	18	9	50.0000
hfeng-pmm3	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	*	97.0406	95.3595	98.7821	83.5045	1459	71	1460	18	9	50.0000
hfeng-pmm3	INDEL	I6_15	HG002complexvar	hetalt	97.0105	94.1946	100.0000	56.3370	1152	71	1192	0	0
hfeng-pmm3	SNP	ti	map_l125_m0_e0	het	99.1947	99.1407	99.2487	75.9543	8192	71	8190	62	6	9.6774
hfeng-pmm2	SNP	tv	map_l100_m0_e0	*	99.1581	99.3594	98.9576	71.7097	11013	71	11012	116	15	12.9310
hfeng-pmm3	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	95.5611	96.0968	95.0314	82.9837	1748	71	1511	79	62	78.4810
hfeng-pmm3	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	95.5611	96.0968	95.0314	82.9837	1748	71	1511	79	62	78.4810
hfeng-pmm1	INDEL	D1_5	*	homalt	99.8651	99.8549	99.8753	58.6796	48855	71	48859	61	60	98.3607
hfeng-pmm3	SNP	tv	map_l125_m1_e0	het	99.3576	99.2988	99.4165	70.9308	10055	71	10053	59	5	8.4746
hfeng-pmm3	SNP	tv	map_l125_m2_e0	het	99.3771	99.3201	99.4342	72.2814	10371	71	10369	59	5	8.4746
hfeng-pmm3	SNP	tv	map_l125_m2_e1	het	99.3837	99.3272	99.4402	72.3386	10482	71	10480	59	5	8.4746
rpoplin-dv42	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.6109	97.4679	99.7809	46.9392	2733	71	2733	6	6	100.0000
rpoplin-dv42	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	het	95.7880	95.3926	96.1867	75.7339	1470	71	1463	58	53	91.3793
rpoplin-dv42	SNP	ti	HG002compoundhet	*	99.6565	99.5938	99.7193	35.2092	17407	71	17405	49	42	85.7143
raldana-dualsentieon	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt	91.2020	83.8269	100.0000	33.9650	368	71	453	0	0
raldana-dualsentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	91.9881	86.7537	97.8947	61.8780	465	71	465	10	9	90.0000
raldana-dualsentieon	SNP	ti	map_siren	homalt	99.8878	99.8127	99.9630	48.3820	37845	71	37839	14	14	100.0000
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	90.1124	96.0968	84.8297	79.1299	1748	71	1644	294	276	93.8776
rpoplin-dv42	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	90.1124	96.0968	84.8297	79.1299	1748	71	1644	294	276	93.8776
raldana-dualsentieon	SNP	tv	map_l125_m0_e0	het	98.3750	98.3640	98.3860	76.8948	4329	72	4328	71	1	1.4085
rpoplin-dv42	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	het	94.6815	98.3806	91.2505	66.8429	4374	72	4349	417	409	98.0815
rpoplin-dv42	INDEL	I16_PLUS	*	homalt	96.6889	95.3876	98.0263	58.4131	1489	72	1490	30	28	93.3333
ndellapenna-hhga	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	76.4026	92.5078	65.0735	61.5548	889	72	1062	570	543	95.2632
ltrigg-rtg2	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	96.4391	93.3824	99.7027	51.0669	1016	72	1006	3	3	100.0000
mlin-fermikit	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	80.9684	93.9086	71.1625	61.2108	1110	72	1108	449	440	97.9955
mlin-fermikit	INDEL	*	map_l150_m0_e0	homalt	61.1296	56.0976	67.1533	85.8617	92	72	92	45	37	82.2222
mlin-fermikit	INDEL	D1_5	map_l100_m0_e0	homalt	70.9924	72.0930	69.9248	75.4613	186	72	186	80	74	92.5000
mlin-fermikit	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	23.2343	13.2530	94.1176	59.5238	11	72	16	1	1	100.0000
ltrigg-rtg1	INDEL	*	map_l150_m1_e0	het	95.1397	91.5789	98.9886	81.0946	783	72	783	8	0	0.0000
jpowers-varprowl	INDEL	*	map_l125_m0_e0	*	93.0500	91.8367	94.2957	90.4640	810	72	810	49	30	61.2245
jpowers-varprowl	INDEL	D16_PLUS	HG002complexvar	homalt	80.0982	75.0865	85.8268	71.4607	217	72	218	36	33	91.6667
jpowers-varprowl	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	79.4286	65.8768	100.0000	53.6667	139	72	139	0	0
jli-custom	INDEL	D16_PLUS	*	het	97.9648	97.7208	98.2100	73.1193	3087	72	2853	52	37	71.1538
jli-custom	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	94.4403	91.3876	97.7041	63.8876	764	72	766	18	15	83.3333
jli-custom	SNP	*	map_l125_m1_e0	homalt	99.7452	99.5741	99.9169	62.6179	16833	72	16833	14	13	92.8571
jli-custom	SNP	tv	map_l250_m2_e0	het	97.5202	96.2887	98.7837	86.3722	1868	72	1868	23	8	34.7826
jli-custom	SNP	tv	map_l250_m2_e1	het	97.5522	96.3359	98.7996	86.4727	1893	72	1893	23	8	34.7826
jpowers-varprowl	INDEL	D6_15	map_l100_m2_e1	hetalt	0.0000	1.3699	0.0000	0.0000	1	72	0	0	0
jpowers-varprowl	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	81.8991	87.2340	77.1791	62.6848	492	72	487	144	112	77.7778
jpowers-varprowl	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	45.2330	51.6779	40.2174	66.9659	77	72	74	110	110	100.0000
jpowers-varprowl	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	96.8385	97.6127	96.0765	79.7850	2944	72	2963	121	4	3.3058
bgallagher-sentieon	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.6223	86.4151	99.7904	48.0392	458	72	476	1	1	100.0000
bgallagher-sentieon	SNP	*	map_l125_m1_e0	homalt	99.7275	99.5741	99.8813	63.4132	16833	72	16833	20	15	75.0000

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