PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FN Query TPQuery FPFP gt% FP ma
6201-6250 / 86044 show all
ltrigg-rtg1INDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.2222
40500
ltrigg-rtg1INDELI1_5map_l125_m0_e0homalt
98.6667
100.0000
97.3684
84.9604
114011131
33.3333
ltrigg-rtg1INDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
95.2381
1701900
ltrigg-rtg1INDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.1831
30400
ltrigg-rtg1INDELI1_5map_l150_m0_e0homalt
99.2366
100.0000
98.4848
88.7564
6706511
100.0000
ltrigg-rtg1INDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
96.5398
901000
ltrigg-rtg1INDELI1_5map_l150_m1_e0homalt
99.2366
100.0000
98.4848
86.5398
198019531
33.3333
ltrigg-rtg1INDELI1_5map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
96.9880
901000
ltrigg-rtg1INDELI1_5map_l150_m2_e0homalt
99.2481
100.0000
98.5075
88.2181
201019831
33.3333
ltrigg-rtg1INDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
96.7456
1001100
ltrigg-rtg1INDELI1_5map_l150_m2_e1homalt
99.2629
100.0000
98.5366
88.2723
204020231
33.3333
ltrigg-rtg1INDELI1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.7532
901000
ltrigg-rtg1INDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.8235
20200
ltrigg-rtg1INDELI1_5map_l250_m1_e0homalt
97.7778
100.0000
95.6522
93.9474
4404421
50.0000
ltrigg-rtg1INDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
99.0385
20200
ltrigg-rtg1INDELI1_5map_l250_m2_e0homalt
97.8261
100.0000
95.7447
94.7894
4504521
50.0000
ltrigg-rtg1INDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
99.0521
20200
ltrigg-rtg1INDELI1_5map_l250_m2_e1homalt
97.8723
100.0000
95.8333
94.8443
4604621
50.0000
ltrigg-rtg1INDELI1_5segduphomalt
99.6825
100.0000
99.3671
92.1924
473047133
100.0000
ltrigg-rtg1INDELI1_5segdupwithalt*
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5segdupwithalthet
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
53.1915
2202200
ltrigg-rtg1INDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
46.6667
80800
ltrigg-rtg1INDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
ltrigg-rtg1INDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
56.6667
1301300
ltrigg-rtg1INDELI6_15decoy*
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15decoyhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15decoyhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15decoyhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15func_cdshet
100.0000
100.0000
100.0000
32.3529
2402300
ltrigg-rtg1INDELI6_15func_cdshomalt
100.0000
100.0000
100.0000
25.0000
1501500
ltrigg-rtg1INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
62.8866
3603600
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
61.7886
9209400
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
62.9032
6806900
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ltrigg-rtg1INDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000