PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtype SubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
84701-84750 / 86044 show all
hfeng-pmm1SNP*map_l100_m2_e0*
99.5855
99.3929
99.7787
64.6417
735154497350416349
30.0613
hfeng-pmm1SNP*map_l100_m2_e0het
99.4228
99.1250
99.7224
65.3363
459934064598212832
25.0000
hfeng-pmm1SNP*map_l100_m2_e0hetalt
100.0000
100.0000
100.0000
78.6802
4204200
hfeng-pmm1SNP*map_l100_m2_e0homalt
99.8583
99.8438
99.8728
63.3749
2748043274803517
48.5714
hfeng-pmm1SNP*map_l100_m2_e1*
99.5878
99.3979
99.7783
64.6489
742874507427616549
29.6970
hfeng-pmm1SNP*map_l100_m2_e1het
99.4258
99.1322
99.7211
65.3522
464914074648013032
24.6154
hfeng-pmm1SNP*map_l100_m2_e1hetalt
100.0000
100.0000
100.0000
78.2828
4304300
hfeng-pmm1SNP*map_l100_m2_e1homalt
99.8597
99.8453
99.8740
63.3660
2775343277533517
48.5714
hfeng-pmm1SNP*map_l125_m0_e0*
99.1962
99.0044
99.3888
74.3664
191921931918911833
27.9661
hfeng-pmm1SNP*map_l125_m0_e0het
98.9783
98.6892
99.2691
75.8999
12498166124959224
26.0870
hfeng-pmm1SNP*map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
85.0000
90900
hfeng-pmm1SNP*map_l125_m0_e0homalt
99.6052
99.5977
99.6126
70.8610
6685276685269
34.6154
hfeng-pmm1SNP*map_l125_m1_e0*
99.4583
99.2389
99.6786
68.9911
449823454497614541
28.2759
hfeng-pmm1SNP*map_l125_m1_e0het
99.2507
98.9117
99.5921
70.2654
280833092807711529
25.2174
hfeng-pmm1SNP*map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
77.6119
3003000
hfeng-pmm1SNP*map_l125_m1_e0homalt
99.8048
99.7870
99.8225
66.5790
1686936168693012
40.0000
hfeng-pmm1SNP*map_l125_m2_e0*
99.4680
99.2509
99.6861
70.6559
463733504636714641
28.0822
hfeng-pmm1SNP*map_l125_m2_e0het
99.2641
98.9290
99.6016
71.5339
290043142899811629
25.0000
hfeng-pmm1SNP*map_l125_m2_e0hetalt
100.0000
100.0000
100.0000
80.7692
3003000
hfeng-pmm1SNP*map_l125_m2_e0homalt
99.8100
99.7928
99.8273
69.0265
1733936173393012
40.0000
hfeng-pmm1SNP*map_l125_m2_e1*
99.4713
99.2564
99.6872
70.6981
468513514684514741
27.8912
hfeng-pmm1SNP*map_l125_m2_e1het
99.2688
98.9372
99.6025
71.5784
293253152931911729
24.7863
hfeng-pmm1SNP*map_l125_m2_e1hetalt
100.0000
100.0000
100.0000
80.7692
3003000
hfeng-pmm1SNP*map_l125_m2_e1homalt
99.8117
99.7947
99.8288
69.0610
1749636174963012
40.0000
hfeng-pmm1SNP*map_l150_m0_e0*
99.0843
98.9362
99.2329
79.6567
11904128119019218
19.5652
hfeng-pmm1SNP*map_l150_m0_e0het
98.8251
98.5390
99.1129
80.9036
782411678217011
15.7143
hfeng-pmm1SNP*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
94.0000
30300
hfeng-pmm1SNP*map_l150_m0_e0homalt
99.5848
99.7065
99.4633
76.6851
4077124077227
31.8182
hfeng-pmm1SNP*map_l150_m1_e0*
99.3336
99.1016
99.5666
73.6726
303342753032813237
28.0303
hfeng-pmm1SNP*map_l150_m1_e0het
99.0880
98.7264
99.4522
74.8794
190702461906410527
25.7143
hfeng-pmm1SNP*map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
81.3084
2002000
hfeng-pmm1SNP*map_l150_m1_e0homalt
99.7516
99.7427
99.7604
71.3075
1124429112442710
37.0370
hfeng-pmm1SNP*map_l150_m2_e0*
99.3518
99.1272
99.5773
75.1179
315742783156813437
27.6119
hfeng-pmm1SNP*map_l150_m2_e0het
99.1127
98.7632
99.4646
75.9700
198842491987810727
25.2336
hfeng-pmm1SNP*map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
83.8710
2002000
hfeng-pmm1SNP*map_l150_m2_e0homalt
99.7606
99.7521
99.7692
73.4870
1167029116702710
37.0370
hfeng-pmm1SNP*map_l150_m2_e1*
99.3543
99.1307
99.5789
75.1677
319302803192413537
27.4074
hfeng-pmm1SNP*map_l150_m2_e1het
99.1153
98.7674
99.4657
76.0302
201122512010610827
25.0000
hfeng-pmm1SNP*map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
83.8710
2002000
hfeng-pmm1SNP*map_l150_m2_e1homalt
99.7632
99.7548
99.7717
73.5145
1179829117982710
37.0370
hfeng-pmm1SNP*map_l250_m0_e0*
98.1512
98.2201
98.0823
92.9304
2097382097419
21.9512
hfeng-pmm1SNP*map_l250_m0_e0het
97.8398
97.7424
97.9375
93.0288
1472341472314
12.9032
hfeng-pmm1SNP*map_l250_m0_e0hetalt
0.0000
100.0000
00000
hfeng-pmm1SNP*map_l250_m0_e0homalt
98.8924
99.3641
98.4252
92.6624
6254625105
50.0000
hfeng-pmm1SNP*map_l250_m1_e0*
98.8139
98.6292
98.9993
88.0247
71239971237216
22.2222
hfeng-pmm1SNP*map_l250_m1_e0het
98.4804
98.1283
98.8350
88.4918
46668946665510
18.1818
hfeng-pmm1SNP*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
93.5484
40400
hfeng-pmm1SNP*map_l250_m1_e0homalt
99.4527
99.5940
99.3117
86.9979
2453102453176
35.2941
hfeng-pmm1SNP*map_l250_m2_e0*
98.8758
98.7191
99.0331
88.4730
778410177847617
22.3684
hfeng-pmm1SNP*map_l250_m2_e0het
98.5614
98.2672
98.8573
88.7531
51049051045911
18.6441