PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtype SubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
85751-85800 / 86044 show all
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
90.9091
100.0000
83.3333
66.6667
50511
100.0000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_11to50homalt
99.9275
99.9275
99.9275
37.0751
27562275622
100.0000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_51to200*
78.8732
66.6667
96.5517
90.6452
28142811
100.0000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_51to200het
75.8621
61.1111
100.0000
90.0901
22142200
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_51to200homalt
92.3077
100.0000
85.7143
92.0455
60611
100.0000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_triTR_11to50*
99.4759
99.0435
99.9122
35.0997
341733341430
0.0000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_triTR_11to50het
99.2232
98.5968
99.8577
35.0385
210830210530
0.0000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
100.0000
01000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_triTR_11to50homalt
99.9237
99.8474
100.0000
35.1338
13092130900
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_triTR_51to200*
100.0000
100.0000
100.0000
98.3051
10100
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
100.0000
97.8723
10100
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1SNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
hfeng-pmm1SNPtvmap_l100_m0_e0*
99.3900
99.2241
99.5564
68.9143
1099886109974915
30.6122
hfeng-pmm1SNPtvmap_l100_m0_e0het
99.2295
98.9754
99.4850
70.4702
71487471473711
29.7297
hfeng-pmm1SNPtvmap_l100_m0_e0hetalt
100.0000
100.0000
100.0000
79.4872
1601600
hfeng-pmm1SNPtvmap_l100_m0_e0homalt
99.6880
99.6880
99.6880
65.4385
3834123834124
33.3333
hfeng-pmm1SNPtvmap_l100_m1_e0*
99.6055
99.4531
99.7584
64.1006
24367134243635917
28.8136
hfeng-pmm1SNPtvmap_l100_m1_e0het
99.4603
99.2216
99.7001
64.9458
15297120152934612
26.0870
hfeng-pmm1SNPtvmap_l100_m1_e0hetalt
100.0000
100.0000
100.0000
76.8362
4104100
hfeng-pmm1SNPtvmap_l100_m1_e0homalt
99.8507
99.8452
99.8562
62.4720
9029149029135
38.4615
hfeng-pmm1SNPtvmap_l100_m2_e0*
99.6119
99.4647
99.7596
65.8235
24899134248956017
28.3333
hfeng-pmm1SNPtvmap_l100_m2_e0het
99.4695
99.2394
99.7006
66.3242
15657120156534712
25.5319
hfeng-pmm1SNPtvmap_l100_m2_e0hetalt
100.0000
100.0000
100.0000
78.6802
4204200
hfeng-pmm1SNPtvmap_l100_m2_e0homalt
99.8535
99.8481
99.8589
64.8359
9200149200135
38.4615
hfeng-pmm1SNPtvmap_l100_m2_e1*
99.6118
99.4660
99.7580
65.8552
25148135251446117
27.8689
hfeng-pmm1SNPtvmap_l100_m2_e1het
99.4686
99.2408
99.6974
66.3712
15817121158134812
25.0000
hfeng-pmm1SNPtvmap_l100_m2_e1hetalt
100.0000
100.0000
100.0000
78.2828
4304300
hfeng-pmm1SNPtvmap_l100_m2_e1homalt
99.8549
99.8495
99.8602
64.8422
9288149288135
38.4615
hfeng-pmm1SNPtvmap_l125_m0_e0*
99.1084
98.9142
99.3035
75.2093
65597265584613
28.2609
hfeng-pmm1SNPtvmap_l125_m0_e0het
98.9058
98.5912
99.2223
76.3803
4339624338349
26.4706
hfeng-pmm1SNPtvmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
85.0000
90900
hfeng-pmm1SNPtvmap_l125_m0_e0homalt
99.5050
99.5498
99.4602
72.4501
2211102211124
33.3333
hfeng-pmm1SNPtvmap_l125_m1_e0*
99.4714
99.2945
99.6491
69.3117
15903113159015616
28.5714
hfeng-pmm1SNPtvmap_l125_m1_e0het
99.2869
99.0026
99.5728
70.2971
10025101100234311
25.5814
hfeng-pmm1SNPtvmap_l125_m1_e0hetalt
100.0000
100.0000
100.0000
77.6119
3003000
hfeng-pmm1SNPtvmap_l125_m1_e0homalt
99.7867
99.7952
99.7782
67.3918
5848125848135
38.4615
hfeng-pmm1SNPtvmap_l125_m2_e0*
99.4866
99.3147
99.6592
71.0071
16376113163745616
28.5714
hfeng-pmm1SNPtvmap_l125_m2_e0het
99.3085
99.0328
99.5858
71.6339
10341101103394311
25.5814
hfeng-pmm1SNPtvmap_l125_m2_e0hetalt
100.0000
100.0000
100.0000
80.7692
3003000
hfeng-pmm1SNPtvmap_l125_m2_e0homalt
99.7923
99.8006
99.7840
69.7785
6005126005135
38.4615
hfeng-pmm1SNPtvmap_l125_m2_e1*
99.4888
99.3156
99.6626
71.0607
16543114165415616
28.5714
hfeng-pmm1SNPtvmap_l125_m2_e1het
99.3110
99.0335
99.5902
71.6922
10451102104494311
25.5814
hfeng-pmm1SNPtvmap_l125_m2_e1hetalt
100.0000
100.0000
100.0000
80.7692
3003000
hfeng-pmm1SNPtvmap_l125_m2_e1homalt
99.7942
99.8024
99.7860
69.8227
6062126062135
38.4615