PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtype SubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
801-850 / 86044 show all
asubramanian-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.7412
2002100
asubramanian-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4015
1201300
asubramanian-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.9697
30300
asubramanian-gatkINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.5238
50500
asubramanian-gatkINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_merged*
98.2746
98.1228
98.4270
77.7694
926761773961101536892
58.0729
asubramanian-gatkINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
98.4217
98.4028
98.4406
75.5838
4750077149303781332
42.5096
asubramanian-gatkINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
96.7294
94.6488
98.9035
60.3171
1459282515424171158
92.3977
asubramanian-gatkINDEL*lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
98.7949
99.4246
98.1731
74.1057
3058417731383584402
68.8356
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331*
96.9134
96.6320
97.1965
74.4490
6315022016587219001174
61.7895
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331het
97.1594
97.2539
97.0650
73.4982
2964383730823932445
47.7468
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
95.8883
93.1278
98.8175
40.7349
15557114816463197178
90.3553
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
97.3939
98.8110
96.0169
66.9230
1795021618586771551
71.4656
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
96.3827
95.6865
97.0892
81.8383
20639320686226
41.9355
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
96.4659
95.6210
97.3258
79.6370
12015512013310
30.3030
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
90.3469
83.8323
97.9592
70.6587
1402714433
100.0000
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
97.5041
98.4993
96.5287
73.6731
722117232613
50.0000
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.7732
1701800
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4714
1001100
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.5909
30300
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.6090
40400
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
98.6299
98.3786
98.8826
80.6311
50368350445714
24.5614
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
98.5454
98.2333
98.8594
76.8466
2947532947345
14.7059
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
96.0495
93.5622
98.6726
77.3774
2181522333
100.0000
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.0742
99.2047
98.9440
72.8770
1871151874206
30.0000
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
98.9775
98.7855
99.1701
81.3679
3579443585306
20.0000
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
98.8761
98.7371
99.0155
76.7875
2111272112212
9.5238
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
96.5069
93.9394
99.2188
80.8096
124812711
100.0000
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.3720
99.3348
99.4092
74.3463
13449134683
37.5000
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
91.6951
91.4187
91.9731
70.0049
55615225603489348
71.1656
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
92.1502
94.7199
89.7161
77.6402
20631151928221141
63.8009
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
91.8050
86.0815
98.3438
38.2217
234437924944235
83.3333
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
90.2679
97.6311
83.9375
60.3774
1154281181226172
76.1062
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.3516
30300
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8495
20200
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
96.2963
10100
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged*
96.2302
96.1664
96.2940
60.8295
3644914533910515051051
69.8339
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhet
96.6230
97.5440
95.7192
65.8529
1425835915451691402
58.1766
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
95.6166
92.7056
98.7164
31.4832
12760100413612177161
90.9605
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
96.4796
99.0547
94.0350
54.6713
94319010042637488
76.6091
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged*
97.0284
97.0399
97.0169
59.6380
31045947336611035709
68.5024
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhet
97.2696
97.9874
96.5623
64.0273
1226925213595484266
54.9587
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
96.5054
94.3089
98.8067
30.3644
1047363211178135126
93.3333
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
97.3524
99.2470
95.5288
54.1878
8303638888416317
76.2019
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged*
96.4383
96.3424
96.5343
67.6863
4175015854440015941079
67.6913
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhet
96.8256
97.5251
96.1361
70.1065
1737844118561746415
55.6300
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
95.5812
92.6383
98.7173
34.2439
12999103313853180164
91.1111
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
96.8292
99.0334
94.7210
60.8998
1137311111986668500
74.8503
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged*
96.9134
96.6320
97.1965
74.4490
6315022016587219001174
61.7895
asubramanian-gatkINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhet
97.1594
97.2539
97.0650
73.4982
2964383730823932445
47.7468