PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubset GenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
4901-4950 / 86044 show all
gduggal-snapfbINDELI6_15segdup*
85.8304
80.5714
91.8239
87.1255
141341461313
100.0000
gduggal-snapfbINDELI6_15segduphet
88.9311
86.7470
91.2281
85.7500
72111041010
100.0000
gduggal-snapfbINDELI6_15segduphetalt
82.7740
82.2222
83.3333
86.0465
3781022
100.0000
gduggal-snapfbINDELI6_15segduphomalt
80.0000
68.0851
96.9697
90.5444
32153211
100.0000
gduggal-snapfbINDELD16_PLUSsegdup*
0.0000
0.0000
0.0000
058000
gduggal-snapfbINDELD16_PLUSsegduphet
0.0000
0.0000
0.0000
037000
gduggal-snapfbINDELD16_PLUSsegduphetalt
0.0000
0.0000
0.0000
09000
gduggal-snapfbINDELD16_PLUSsegduphomalt
0.0000
0.0000
0.0000
012000
gduggal-snapfbINDELD6_15segdup*
84.6900
76.4398
94.9367
90.2107
1464515088
100.0000
gduggal-snapfbINDELD6_15segduphet
82.4566
71.7391
96.9388
89.5075
66269533
100.0000
gduggal-snapfbINDELD6_15segduphetalt
81.9277
69.3878
100.0000
90.0000
3415800
gduggal-snapfbINDELD6_15segduphomalt
91.1852
92.0000
90.3846
91.3333
4644755
100.0000
gduggal-snapfbINDELI16_PLUSsegdup*
0.0000
0.0000
0.0000
047000
gduggal-snapfbINDELI16_PLUSsegduphet
0.0000
0.0000
0.0000
024000
gduggal-snapfbINDELI16_PLUSsegduphetalt
0.0000
0.0000
0.0000
04000
gduggal-snapfbINDELI16_PLUSsegduphomalt
0.0000
0.0000
0.0000
019000
gduggal-snapfbINDELI1_5segdup*
95.1081
96.7894
93.4842
94.5833
10253410337218
25.0000
gduggal-snapfbINDELI1_5segduphet
93.6061
96.2825
91.0744
94.8537
518205515410
18.5185
gduggal-snapfbINDELI1_5segduphetalt
87.9440
89.5833
86.3636
97.6471
4351931
33.3333
gduggal-snapfbINDELI1_5segduphomalt
97.4757
98.0973
96.8619
93.7995
4649463157
46.6667
gduggal-snapfbINDELD1_5segdup*
97.3404
97.4615
97.2197
94.7311
1075281084315
16.1290
gduggal-snapfbINDELD1_5segduphet
97.2186
97.8324
96.6125
94.2604
67715713253
12.0000
gduggal-snapfbINDELD1_5segduphetalt
90.5263
82.6923
100.0000
98.1308
4391400
gduggal-snapfbINDELD1_5segduphomalt
98.6157
98.8858
98.3471
95.1952
355435762
33.3333
gduggal-bwavardINDELI16_PLUSsegdup*
77.0833
78.7234
75.5102
94.6389
371037126
50.0000
gduggal-bwavardINDELI16_PLUSsegduphet
75.8621
91.6667
64.7059
95.7500
22222126
50.0000
gduggal-bwavardINDELI16_PLUSsegduphetalt
0.0000
0.0000
0.0000
04000
gduggal-bwavardINDELI16_PLUSsegduphomalt
88.2353
78.9474
100.0000
86.8421
1541500
gduggal-bwavardINDELI1_5segdup*
92.2615
90.9348
93.6275
94.8607
963969556556
86.1538
gduggal-bwavardINDELI1_5segduphet
92.9009
96.6543
89.4281
96.3152
520185166152
85.2459
gduggal-bwavardINDELI1_5segduphetalt
0.0000
0.0000
0.0000
048000
gduggal-bwavardINDELI1_5segduphomalt
96.3005
93.6575
99.0971
89.4222
4433043944
100.0000
gduggal-bwavardINDELD6_15segdup*
68.8950
65.9686
72.0930
94.5707
126651244848
100.0000
gduggal-bwavardINDELD6_15segduphet
77.0066
95.6522
64.4444
95.1837
884874848
100.0000
gduggal-bwavardINDELD6_15segduphetalt
0.0000
2.0408
0.0000
0.0000
148000
gduggal-bwavardINDELD6_15segduphomalt
85.0575
74.0000
100.0000
89.8630
37133700
gduggal-bwavardINDELC1_5segdup*
0.0000
0.0000
68.0000
99.2789
001783
37.5000
gduggal-bwavardINDELC1_5segduphet
0.0000
0.0000
61.9048
99.3151
001383
37.5000
gduggal-bwavardINDELC1_5segduphetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardINDELC1_5segduphomalt
0.0000
0.0000
100.0000
99.0025
00400
gduggal-bwavardINDELD16_PLUSsegdup*
79.8443
81.0345
78.6885
95.9816
471148136
46.1538
gduggal-bwavardINDELD16_PLUSsegduphet
84.0644
97.2973
74.0000
96.3530
36137136
46.1538
gduggal-bwavardINDELD16_PLUSsegduphetalt
0.0000
0.0000
0.0000
09000
gduggal-bwavardINDELD16_PLUSsegduphomalt
95.6522
91.6667
100.0000
92.5170
1111100
gduggal-bwavardINDELD1_5segdup*
92.2805
91.6591
92.9104
95.4235
1011929967657
75.0000
gduggal-bwavardINDELD1_5segduphet
93.9882
98.5549
89.8260
96.1006
682106717657
75.0000
gduggal-bwavardINDELD1_5segduphetalt
0.0000
1.9231
0.0000
0.0000
151000
gduggal-bwavardINDELD1_5segduphomalt
95.4876
91.3649
100.0000
92.3834
3283132500
gduggal-bwavardINDELC6_15segdup*
0.0000
0.0000
50.0000
98.9150
00331
33.3333
gduggal-bwavardINDELC6_15segduphet
0.0000
0.0000
50.0000
98.7928
00331
33.3333